Detailed information NTG1070977

Bioinformatically predicted

Overview

• Name: rec2
• Type: Machinery gene
• Locus tag: ACIO06_RS12040
• Genome accession: NZ_CP173230
• Coordinates: 2451682..2454141 (+)
• Length: 819 a.a.
• NCBI ID: WP_410681114.1
• Uniprot ID: -
• Organism: Avibacterium paragallinarum strain npAP/GA-USA/20231216/S1-2
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2446682..2459141

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIO06_RS12020 (ACIO06_12020)	-	2447683..2448903 (-)	1221	WP_017805728.1	NRAMP family divalent metal transporter	-
ACIO06_RS12025 (ACIO06_12025)	thiE	2448904..2449566 (-)	663	WP_410680134.1	thiamine phosphate synthase	-
ACIO06_RS12030 (ACIO06_12030)	thiD	2449559..2450377 (-)	819	WP_264246239.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
ACIO06_RS12035 (ACIO06_12035)	thiM	2450389..2451192 (-)	804	WP_410680135.1	hydroxyethylthiazole kinase	-
ACIO06_RS12040 (ACIO06_12040)	rec2	2451682..2454141 (+)	2460	WP_410681114.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACIO06_RS12045 (ACIO06_12045)	msbA	2454360..2456108 (+)	1749	WP_410680136.1	lipid A ABC transporter ATP-binding protein/permease MsbA	-
ACIO06_RS12050 (ACIO06_12050)	lpxK	2456124..2457134 (+)	1011	WP_410680137.1	tetraacyldisaccharide 4'-kinase	-
ACIO06_RS12055 (ACIO06_12055)	-	2457309..2457491 (+)	183	WP_410680138.1	Trm112 family protein	-
ACIO06_RS12060 (ACIO06_12060)	kdsB	2457488..2458270 (+)	783	WP_410680139.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 819 a.a.
• Molecular weight: 92338.79 Da
• Isoelectric Point: 9.7735

>NTDB_id=1070977 ACIO06_RS12040 WP_410681114.1 2451682..2454141(+) (rec2) [Avibacterium paragallinarum strain npAP/GA-USA/20231216/S1-2]
MGLRLDTLLWLVIAAGLTLLFVPQSFLLEPKQSAWLAGIAVVGCGVAYWIKRQGLAKFFAYGAIFVLCLADFHYQAQQLL
QQAHAVAGLEKRIEREIRIVEVLHQQDYQTLIATAQLDETLPEQRLYVQWQRAEKVAVGQRWRAELSLRPLSSRLNEGGF
DRQKWYFSKGITAYAKVKSAVKISEDFSWREARLQTAFQHTQALSMQGLLLALGFGERAWLQPTHWQIYQKTNTAHLIAI
SGLHIGLAMLLGVGIARGIQFCLPTYWITPMFPLFIGAIIALIYAYLAGFSIPTLRALVALGLVCLVRGLRFYHTPWQYF
QRVVAVLIFCQPLMVLSVSFWLSVGAVASLILWYQYVPLDLFQPRTDLVRQDRPFSLGAIIGKLILRWCVALLHLQLGLL
LVFTPVQLYFFHGFSLAGMIANVFAVPLFSFFLVPLVLFAVLSNGAFSSWQGANELAEKITIFLSNWQHKWIDLSQTQSQ
WIGLGLCALGLSYVFGLWQVQKNHSLNRQKSIPFIQDRTLAKWKWRLNPDKIPSVLCLKKLGVVLVLIFLVNGRNLLVTH
FRQPDWRLETLDVGQGLATLIVKEQRGILYDTGAAWQNGSMAELEILPYLRRQGIVLDYLILSHDDNDHAGGAEAVLRAY
PNATLITSSEKIERKTHRTFCFAGTQWQWQGLQISALSPQKVVKRAENNDSCVLLIDDGRHKVLLTGDAESQIEPQFIYK
AGKIDVLQVGHHGSKTSTSEALVKTLQPSIALISSGRGNPWHFPHYAVLARLQTQQSAVLNTADFGQIRLSFSANKPPPE
NISIDTARGTFSPWYRELL

Nucleotide

• Length: 2460 bp

>NTDB_id=1070977 ACIO06_RS12040 WP_410681114.1 2451682..2454141(+) (rec2) [Avibacterium paragallinarum strain npAP/GA-USA/20231216/S1-2]
ATTGGCCTGAGGCTCGATACCCTGTTATGGCTTGTGATCGCCGCGGGCTTAACCTTGCTTTTTGTGCCGCAATCTTTTTT
GCTTGAGCCAAAGCAAAGTGCGTGGCTGGCGGGGATTGCGGTGGTGGGCTGTGGTGTTGCCTATTGGATTAAGCGTCAAG
GACTAGCGAAATTTTTCGCCTATGGTGCGATATTTGTGCTATGCCTTGCGGATTTTCATTATCAGGCACAGCAGCTCTTA
CAGCAGGCTCACGCCGTTGCGGGGCTTGAAAAACGCATTGAGCGGGAAATTCGCATTGTCGAAGTACTACATCAGCAAGA
TTATCAAACCCTTATCGCCACCGCTCAGCTTGATGAAACCCTGCCTGAACAACGCCTTTATGTGCAATGGCAAAGGGCGG
AAAAAGTGGCAGTCGGACAGCGTTGGCGAGCGGAATTATCCCTACGTCCATTGTCTAGTCGGCTAAATGAGGGGGGATTT
GATCGGCAAAAATGGTATTTTTCAAAGGGGATTACCGCCTATGCAAAGGTGAAAAGTGCGGTCAAAATTTCGGAGGATTT
TTCTTGGCGGGAAGCAAGGTTACAAACCGCATTTCAGCACACTCAAGCCCTCTCAATGCAAGGGCTATTGCTGGCGTTAG
GATTTGGTGAACGGGCGTGGTTGCAGCCAACTCATTGGCAAATCTACCAAAAAACCAATACCGCTCATCTTATCGCTATT
TCAGGGCTACATATTGGCTTGGCAATGTTGCTTGGCGTTGGCATTGCTCGAGGGATACAATTTTGCTTGCCGACCTATTG
GATCACGCCGATGTTTCCGCTTTTTATTGGGGCAATAATCGCATTGATTTATGCCTATTTAGCGGGATTTTCTATTCCCA
CCCTGCGGGCGTTGGTAGCATTGGGGCTGGTGTGTTTAGTGCGAGGGTTGCGTTTTTATCACACCCCTTGGCAATATTTT
CAGCGGGTGGTAGCAGTGCTGATTTTCTGCCAGCCGTTAATGGTGCTATCGGTGAGTTTTTGGCTATCAGTAGGGGCGGT
AGCAAGTTTGATTTTATGGTATCAATATGTGCCGTTGGATTTGTTTCAGCCACGAACTGATTTAGTCAGGCAGGATCGCC
CGTTCTCTTTAGGGGCAATAATCGGTAAGCTCATACTACGCTGGTGCGTAGCATTGTTGCATTTGCAACTGGGCTTATTG
TTAGTGTTCACCCCCGTTCAGCTTTACTTTTTTCACGGTTTTTCTTTAGCGGGAATGATCGCGAATGTTTTTGCTGTACC
GTTGTTCAGCTTTTTTCTTGTTCCGCTCGTGCTATTTGCGGTACTCAGCAACGGCGCATTTTCTTCTTGGCAAGGAGCAA
ATGAATTGGCAGAAAAGATCACCATTTTTCTGTCAAATTGGCAACATAAATGGATCGATCTTTCCCAAACGCAATCGCAA
TGGATCGGGCTTGGGCTGTGTGCATTGGGGCTGAGCTATGTTTTTGGCTTATGGCAAGTACAGAAAAATCACTCGCTGAA
TAGGCAAAAATCCATTCCGTTCATTCAGGATCGCACTTTGGCAAAATGGAAATGGAGGTTAAACCCTGACAAAATCCCCT
CAGTATTATGCTTAAAAAAGCTAGGTGTTGTACTGGTGCTTATTTTTCTCGTCAATGGCAGAAATTTGTTGGTAACCCAT
TTTCGGCAACCCGATTGGCGGCTTGAAACCCTTGATGTGGGGCAGGGGCTTGCCACCTTGATCGTTAAAGAGCAGCGGGG
GATTTTGTACGATACAGGGGCGGCTTGGCAAAATGGCAGTATGGCAGAATTAGAAATTTTGCCTTATTTACGGCGGCAGG
GCATTGTGCTGGATTACCTTATTTTAAGCCACGACGACAATGATCACGCAGGCGGGGCTGAAGCGGTGTTGCGGGCTTAT
CCCAATGCGACGCTTATTACGTCATCGGAAAAAATCGAGCGAAAAACGCACCGCACTTTTTGTTTCGCGGGAACGCAATG
GCAGTGGCAAGGGTTGCAGATTTCAGCCCTTTCACCGCAAAAGGTGGTGAAACGAGCGGAAAATAATGATTCGTGCGTGC
TGTTGATCGATGATGGGCGGCATAAAGTGTTGCTCACAGGCGACGCGGAAAGCCAAATTGAACCACAGTTTATTTACAAG
GCAGGGAAAATTGACGTGTTACAGGTCGGACATCACGGCAGCAAAACCTCTACCAGCGAGGCATTGGTGAAAACCTTGCA
ACCTAGCATTGCGTTGATTTCTAGTGGACGGGGAAACCCTTGGCATTTCCCGCATTACGCGGTGTTAGCACGTTTGCAAA
CACAGCAAAGTGCGGTGTTAAATACGGCAGATTTTGGACAAATTCGCCTTTCTTTTTCAGCCAATAAGCCACCGCCTGAA
AATATCAGCATTGACACTGCACGGGGAACGTTTTCCCCTTGGTATCGGGAATTATTGTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (213-495)

• Domain of unknown function (DUF4131) (DUF4131) (33-180)

• Metallo-beta-lactamase superfamily (Lactamase_B) (572-754)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rec2	Haemophilus influenzae Rd KW20	52.81	93.407	0.493