Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | ACIC53_RS25555 | Genome accession | NZ_CP173219 |
| Coordinates | 5421449..5422006 (+) | Length | 185 a.a. |
| NCBI ID | WP_019486632.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain HN41 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5416449..5427006
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACIC53_RS25535 (ACIC53_25535) | pilR | 5417725..5419062 (+) | 1338 | WP_003110427.1 | two-component system response regulator PilR | Regulator |
| ACIC53_RS25540 (ACIC53_25540) | thiO | 5419108..5420202 (-) | 1095 | WP_023094393.1 | glycine oxidase ThiO | - |
| ACIC53_RS25545 (ACIC53_25545) | - | 5420337..5420846 (+) | 510 | WP_019486634.1 | Tfp pilus assembly protein FimT/FimU | - |
| ACIC53_RS25550 (ACIC53_25550) | - | 5420952..5421458 (+) | 507 | WP_019486633.1 | Tfp pilus assembly protein FimT/FimU | - |
| ACIC53_RS25555 (ACIC53_25555) | pilV | 5421449..5422006 (+) | 558 | WP_019486632.1 | type 4a pilus minor pilin PilV | Machinery gene |
| ACIC53_RS25560 (ACIC53_25560) | pilW | 5422003..5422827 (+) | 825 | WP_023094394.1 | type 4a pilus minor pilin PilW | - |
| ACIC53_RS25565 (ACIC53_25565) | pilX | 5422824..5423411 (+) | 588 | WP_003094700.1 | type 4a pilus minor pilin PilX | - |
| ACIC53_RS25570 (ACIC53_25570) | pilY1 | 5423423..5426908 (+) | 3486 | WP_019486630.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20086.26 Da Isoelectric Point: 7.9204
>NTDB_id=1070679 ACIC53_RS25555 WP_019486632.1 5421449..5422006(+) (pilV) [Pseudomonas aeruginosa strain HN41]
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPTSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLMSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPTSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLMSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=1070679 ACIC53_RS25555 WP_019486632.1 5421449..5422006(+) (pilV) [Pseudomonas aeruginosa strain HN41]
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAGTCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGAATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGACCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGATGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAGTCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGAATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGACCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGATGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
97.838 |
100 |
0.978 |