Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACIGXT_RS07085 Genome accession   NZ_CP173038
Coordinates   1351225..1351689 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain Shannan.BV80-12     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1346225..1356689
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACIGXT_RS07065 (ACIGXT_07065) - 1346705..1348525 (+) 1821 WP_003154628.1 PAS domain-containing protein -
  ACIGXT_RS07070 (ACIGXT_07070) - 1348501..1349720 (-) 1220 Protein_1333 aminotransferase A -
  ACIGXT_RS07075 (ACIGXT_07075) - 1349921..1350082 (-) 162 WP_007409608.1 hypothetical protein -
  ACIGXT_RS07080 (ACIGXT_07080) cheV 1350271..1351182 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  ACIGXT_RS07085 (ACIGXT_07085) kre 1351225..1351689 (-) 465 WP_003154622.1 YkyB family protein Regulator
  ACIGXT_RS07090 (ACIGXT_07090) - 1351812..1353104 (-) 1293 WP_044053156.1 MFS transporter -
  ACIGXT_RS07095 (ACIGXT_07095) - 1353180..1353674 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  ACIGXT_RS07100 (ACIGXT_07100) - 1353749..1354612 (-) 864 WP_024085238.1 metallophosphoesterase -
  ACIGXT_RS07105 (ACIGXT_07105) fadH 1354756..1355520 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  ACIGXT_RS07110 (ACIGXT_07110) - 1355631..1356176 (+) 546 Protein_1341 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=1070107 ACIGXT_RS07085 WP_003154622.1 1351225..1351689(-) (kre) [Bacillus velezensis strain Shannan.BV80-12]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1070107 ACIGXT_RS07085 WP_003154622.1 1351225..1351689(-) (kre) [Bacillus velezensis strain Shannan.BV80-12]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment