Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   ACG2K1_RS10260 Genome accession   NZ_CP173024
Coordinates   2060548..2062587 (-) Length   679 a.a.
NCBI ID   WP_395429476.1    Uniprot ID   -
Organism   Neisseria sp. 23W00296     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2055548..2067587
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACG2K1_RS10235 (ACG2K1_10235) - 2056145..2056483 (-) 339 WP_395429481.1 DUF2750 domain-containing protein -
  ACG2K1_RS10240 (ACG2K1_10240) argG 2056619..2057956 (+) 1338 WP_395429480.1 argininosuccinate synthase -
  ACG2K1_RS10245 (ACG2K1_10245) - 2058111..2058680 (+) 570 WP_395429479.1 GNAT family N-acetyltransferase -
  ACG2K1_RS10250 (ACG2K1_10250) - 2058904..2059506 (+) 603 WP_395429478.1 hypothetical protein -
  ACG2K1_RS10255 (ACG2K1_10255) - 2059570..2060385 (-) 816 WP_395429477.1 M48 family metallopeptidase -
  ACG2K1_RS10260 (ACG2K1_10260) recG 2060548..2062587 (-) 2040 WP_395429476.1 ATP-dependent DNA helicase RecG Machinery gene
  ACG2K1_RS10265 (ACG2K1_10265) tldD 2062966..2064456 (+) 1491 WP_395429493.1 metalloprotease TldD -
  ACG2K1_RS10270 (ACG2K1_10270) - 2064590..2064814 (-) 225 WP_009424911.1 sulfurtransferase TusA family protein -
  ACG2K1_RS10275 (ACG2K1_10275) - 2064948..2065550 (+) 603 WP_395429475.1 CNP1-like family protein -
  ACG2K1_RS10280 (ACG2K1_10280) - 2065752..2066558 (-) 807 WP_395429492.1 integrase core domain-containing protein -
  ACG2K1_RS10285 (ACG2K1_10285) - 2066509..2067381 (-) 873 WP_402837154.1 DDE-type integrase/transposase/recombinase -

Sequence

Protein


Download         Length: 679 a.a.        Molecular weight: 75024.01 Da        Isoelectric Point: 7.7225

>NTDB_id=1069966 ACG2K1_RS10260 WP_395429476.1 2060548..2062587(-) (recG) [Neisseria sp. 23W00296]
MTPETRKQLKITDTAAKKLEKLNLHTAWDLVLHLPLRYEDETHIMPLQDAPVGVPCQVEGTVLHQEVMFKPRKQLIVQIG
DNAGNVLFLRFIHFYPSQQKQLAVGKRIRAVGEIKHGFYGDEMIHPKIRDAETSGLAESLTPVYPTVNGLNQPTLRRIIQ
TALDDTPLHDTLPDALLGRLKLPHLAESLRLLHAPPPSLSVQQLSDGALPAWQRLKFDELLAQQLSMRLARQKRISGQAA
PLTGNGTLSQPLLNALPFVLTRAQEKALAEIRQDMAQTFPMHRLLQGDVGSGKTIVAALAALAAVEAGAQVAVMAPTEIL
AEQHFIKFKQWFEPLGLDIAWLSGSQRKKAKDEAKAQLSDGLAKIAVGTHALFQDDVAFQNLGLVIVDEQHRFGVTQRLA
LKNKGRDVHQLMMSATPIPRTLAMSFFADLEVSVIDELPPGRTPIQTRLVNSLRRAEVEGYLLNICRKGQQAYWVCPLIE
ESETLQLQTATETLEQLQTALPELNIGLVHGRMKAAEKAAVMAEFAAGRLNVLVATTVIEVGVDVPNAALMVIEHAERMG
LAQLHQLRGRVGRGAAKSVCVLLFAEPLSELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFANLEQD
LHLLEHARDIAPQLIEQNPDIVKAHLDRWLASRAAYMGA

Nucleotide


Download         Length: 2040 bp        

>NTDB_id=1069966 ACG2K1_RS10260 WP_395429476.1 2060548..2062587(-) (recG) [Neisseria sp. 23W00296]
ATGACGCCCGAAACCCGAAAACAGCTCAAAATCACCGACACCGCCGCCAAAAAGCTGGAAAAGCTCAATCTGCACACCGC
TTGGGATTTGGTGCTGCACCTGCCGCTGCGCTATGAAGACGAAACCCACATCATGCCGCTGCAAGACGCGCCCGTCGGCG
TACCCTGTCAGGTGGAAGGCACGGTGCTGCATCAGGAAGTCATGTTCAAACCGCGCAAGCAACTGATTGTGCAAATCGGC
GACAACGCGGGCAACGTGTTGTTTTTGCGCTTTATCCATTTTTACCCGAGTCAGCAGAAGCAGCTTGCCGTCGGCAAGCG
CATCCGCGCCGTGGGCGAAATCAAACACGGTTTTTACGGCGACGAGATGATTCACCCCAAAATCCGCGATGCCGAAACGA
GCGGCCTCGCCGAGAGCCTCACTCCGGTTTATCCCACCGTAAACGGGCTGAACCAGCCCACCCTGCGCCGCATCATTCAG
ACGGCCTTAGACGACACCCCGCTGCACGACACCCTGCCCGACGCGCTGTTAGGCCGTCTGAAACTGCCGCATCTGGCCGA
AAGCCTGCGCCTTTTGCACGCGCCGCCGCCGAGCCTGAGCGTGCAGCAGTTGTCCGACGGCGCACTGCCCGCATGGCAGC
GGCTCAAATTCGACGAACTGCTGGCGCAGCAGCTTTCCATGCGGCTGGCTCGGCAAAAGCGCATCAGCGGTCAGGCCGCA
CCGCTGACCGGCAACGGCACATTGTCGCAGCCCCTGTTAAACGCACTGCCCTTCGTCCTCACCCGCGCCCAAGAAAAAGC
CCTGGCCGAAATCCGGCAGGACATGGCGCAAACCTTTCCCATGCACCGTCTGTTGCAGGGCGATGTCGGCAGCGGAAAAA
CCATCGTCGCCGCGCTGGCCGCACTTGCCGCCGTGGAAGCCGGTGCACAAGTGGCCGTGATGGCCCCCACCGAAATCCTC
GCCGAACAGCACTTTATCAAGTTCAAACAATGGTTTGAACCGCTCGGCCTCGACATCGCGTGGCTCTCGGGCAGCCAGCG
CAAAAAAGCCAAAGACGAAGCCAAAGCACAGCTTTCAGACGGCCTTGCCAAAATCGCCGTCGGCACGCACGCCCTGTTTC
AAGACGACGTGGCCTTTCAAAACCTCGGCCTCGTGATTGTCGACGAACAACACCGCTTCGGCGTTACCCAACGCCTCGCC
CTCAAAAACAAAGGCCGCGACGTGCACCAGCTGATGATGTCCGCCACCCCCATCCCGCGCACCCTCGCCATGAGCTTTTT
CGCCGACCTCGAAGTATCCGTCATCGACGAGCTGCCGCCCGGCCGCACCCCCATCCAAACCCGCCTCGTCAACAGCCTGC
GCCGCGCCGAAGTCGAAGGCTACCTGCTCAATATCTGCCGCAAAGGGCAACAGGCATACTGGGTCTGCCCCCTAATTGAA
GAGAGCGAAACCCTGCAACTGCAAACCGCCACCGAAACCCTGGAGCAGCTTCAGACGGCCTTGCCCGAACTCAACATCGG
CCTCGTACACGGCCGCATGAAAGCCGCCGAAAAAGCCGCTGTGATGGCCGAATTTGCCGCAGGCCGTCTGAACGTACTCG
TCGCCACCACCGTGATCGAAGTCGGCGTGGATGTGCCCAACGCCGCGCTGATGGTGATCGAACACGCCGAACGCATGGGC
CTGGCGCAACTGCACCAACTGCGCGGGCGCGTCGGGCGCGGCGCGGCCAAAAGCGTGTGCGTCCTTTTGTTTGCCGAGCC
GTTGAGCGAATTGGCCAAAGCACGGCTGAAAGTGATTTACGAGCACACCGACGGCTTTGAAATCGCCCGCCAAGACCTCA
ACATCCGCGGCCCCGGCGAATTTCTCGGCGCACGCCAGAGCGGCGTACCCATGCTGCGCTTCGCCAACTTGGAACAGGAT
TTGCACCTGTTGGAACACGCCCGCGACATCGCCCCGCAGTTAATCGAACAGAATCCCGACATCGTCAAAGCCCATTTGGA
CAGATGGCTCGCCAGCCGCGCCGCCTACATGGGCGCGTAA

Domains

Predicted by InterproScan.

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(603-665)

DEAD/DEAH box helicase (DEAD)

(262-418)

Helicase conserved C-terminal domain (Helicase_C)

(463-574)

RecG wedge domain (RecG_wedge)

(12-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

85.398

99.853

0.853

Multiple sequence alignment