Detailed information NTG1069769

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: RSP597_RS08285
• Genome accession: NZ_CP172969
• Coordinates: 1727732..1728895 (+)
• Length: 387 a.a.
• NCBI ID: WP_247546103.1
• Uniprot ID: -
• Organism: Ralstonia solanacearum strain P597
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1722732..1733895

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RSP597_RS08260 (RSP597_008260)	-	1723108..1723356 (-)	249	WP_003262548.1	YfhL family 4Fe-4S dicluster ferredoxin	-
RSP597_RS08265 (RSP597_008265)	coaD	1723407..1723913 (-)	507	WP_003262550.1	pantetheine-phosphate adenylyltransferase	-
RSP597_RS08270 (RSP597_008270)	rsmD	1724109..1724756 (-)	648	WP_064045777.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
RSP597_RS08275 (RSP597_008275)	-	1724835..1726178 (-)	1344	WP_042590494.1	pitrilysin family protein	-
RSP597_RS08280 (RSP597_008280)	-	1726178..1727671 (-)	1494	WP_064045778.1	pitrilysin family protein	-
RSP597_RS08285 (RSP597_008285)	pilA	1727732..1728895 (+)	1164	WP_247546103.1	signal recognition particle-docking protein FtsY	Machinery gene
RSP597_RS08290 (RSP597_008290)	maiA	1729098..1729748 (-)	651	WP_064045780.1	maleylacetoacetate isomerase	-
RSP597_RS08295 (RSP597_008295)	-	1729752..1730453 (-)	702	WP_064045781.1	fumarylacetoacetate hydrolase family protein	-
RSP597_RS08300 (RSP597_008300)	-	1730604..1731230 (+)	627	WP_039555963.1	ANTAR domain-containing response regulator	-
RSP597_RS08305 (RSP597_008305)	-	1731509..1732771 (+)	1263	WP_013207059.1	CmpA/NrtA family ABC transporter substrate-binding protein	-
RSP597_RS08310 (RSP597_008310)	ntrB	1732821..1733672 (+)	852	WP_013207060.1	nitrate ABC transporter permease	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 41046.50 Da
• Isoelectric Point: 6.1623

>NTDB_id=1069769 RSP597_RS08285 WP_247546103.1 1727732..1728895(+) (pilA) [Ralstonia solanacearum strain P597]
MFSFWKKRKAEPQPAAEPAPPAAAPEAAQAQVPAPVASPAPAPAPVASPVAVPVASPVAVPDTPAAPAALDMQADDIETV
PTPPVMEQARKGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLNELRRRVKAQRIETAES
VKTALRDLLIELLHPLEKTMVLGRDQPMVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQR
NNVTVVAQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMVTAPHETLLVIDANTGQNA
LAQVKAFDDTLGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1164 bp

>NTDB_id=1069769 RSP597_RS08285 WP_247546103.1 1727732..1728895(+) (pilA) [Ralstonia solanacearum strain P597]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCCGCCGAACCCGCGCCGCCCGCCGCCGCGCCCGAAGC
CGCCCAGGCCCAGGTACCGGCCCCGGTTGCCTCCCCCGCCCCTGCACCCGCCCCGGTTGCCTCCCCAGTTGCCGTGCCGG
TTGCCTCCCCGGTTGCCGTGCCGGATACGCCGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGACGACATCGAGACCGTA
CCGACGCCGCCCGTGATGGAGCAGGCGCGCAAGGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAG
CCTGACCACGCTGTTCGTCGGCGTGAAGGTGGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATG
CCGGCGTGGATGCCACCGAATACCTGCTGAACGAGCTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGAGC
GTGAAGACCGCGCTGCGCGATCTGCTCATCGAGCTGCTGCATCCGCTGGAAAAAACCATGGTGCTCGGCCGCGACCAGCC
GATGGTGATCATGATTGCGGGCGTCAACGGTGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCT
ACGGGCAGTCCGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCCGCCGCCCGCGAGCAACTGGTGATCTGGGGCCAGCGC
AACAACGTGACCGTGGTGGCACAGGAGTCGGGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCG
CGGCATCGACATCGTCATGGCCGACACCGCCGGCCGCCTGCCGACCCAGTTGCACCTGATGGAAGAGCTGAAGAAGGTGC
GCCGCGTGATCGGCAAGGCCATGGTGACGGCGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCG
CTGGCGCAGGTGAAGGCCTTCGACGATACGCTCGGTCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAGGG
CGGCATCCTGGCCGCCATCGCGCGGCAGCGGCCGGTGCCGGTGTATTTCATCGGCGTGGGCGAGCAGGTCGAAGACCTGC
AACCGTTCTCCGCGCGCGAATTCGCCGACGCGCTGCTGGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (106-167)

• SRP54-type protein, GTPase domain (SRP54) (187-387)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.885	100	0.568