Detailed information NTG1069752

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: ACF2JY_RS20530
• Genome accession: NZ_CP172966
• Coordinates: 3949794..3950906 (-)
• Length: 370 a.a.
• NCBI ID: WP_003243515.1
• Uniprot ID: A0AAE2SM46
• Organism: Bacillus subtilis strain cel
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3944794..3955906

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACF2JY_RS20515 (ACF2JY_20515)	gyrA	3944884..3947349 (-)	2466	WP_014475555.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	-
ACF2JY_RS20520 (ACF2JY_20520)	gyrB	3947560..3949476 (-)	1917	WP_003226808.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
ACF2JY_RS20525 (ACF2JY_20525)	remB	3949531..3949776 (-)	246	WP_003219266.1	extracellular matrix regulator RemB	-
ACF2JY_RS20530 (ACF2JY_20530)	recF	3949794..3950906 (-)	1113	WP_003243515.1	DNA replication/repair protein RecF	Machinery gene
ACF2JY_RS20535 (ACF2JY_20535)	rlbA	3950922..3951137 (-)	216	WP_003226810.1	ribosome maturation protein RlbA	-
ACF2JY_RS20540 (ACF2JY_20540)	dnaN	3951268..3952404 (-)	1137	WP_003242509.1	DNA polymerase III subunit beta	-
ACF2JY_RS20545 (ACF2JY_20545)	dnaA	3952593..3953933 (-)	1341	WP_046380710.1	chromosomal replication initiator protein DnaA	-
ACF2JY_RS20550 (ACF2JY_20550)	rpmH	3954560..3954694 (+)	135	WP_003178075.1	50S ribosomal protein L34	-
ACF2JY_RS20555 (ACF2JY_20555)	rnpA	3954846..3955196 (+)	351	WP_003242628.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42304.34 Da
• Isoelectric Point: 7.3660

>NTDB_id=1069752 ACF2JY_RS20530 WP_003243515.1 3949794..3950906(-) (recF) [Bacillus subtilis strain cel]
MYIQNLELTSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGA
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDRTMLDVLTDQLVEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKI
GDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=1069752 ACF2JY_RS20530 WP_003243515.1 3949794..3950906(-) (recF) [Bacillus subtilis strain cel]
TTGTATATCCAGAACTTAGAACTGACATCTTACCGCAACTACGACCATGCTGAACTTCAATTTGAAAATAAAGTAAATGT
GATCATCGGAGAAAACGCCCAGGGGAAGACAAACCTCATGGAGGCGATCTATGTCTTGTCCATGGCGAAATCGCACCGGA
CATCAAATGACAAAGAACTTATACGGTGGGACAAAGACTATGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGGCA
ATCCCGATGCAGCTCGTCATCTCCAAAAAGGGTAAAAAGGGCAAGGTCAATCATATTGAACAGCAAAAGCTCAGCCAGTA
TGTCGGGGCCCTCAACACCATTATGTTCGCGCCGGAAGATTTAAATCTTGTAAAGGGAAGCCCTCAAGTGAGAAGGCGGT
TTCTTGACATGGAAATCGGACAGGTTTCTCCCGTCTACCTTCATGATCTTTCTCTTTACCAGAAAATCCTTTCCCAGCGG
AATCATTTTTTGAAACAGCTGCAAACAAGAAAACAAACTGACCGGACGATGCTCGATGTTCTGACCGATCAGCTTGTAGA
AGTTGCAGCAAAAGTCGTCGTAAAACGCCTGCAGTTTACAGCACAGCTCGAGAAATGGGCGCAGCCCATCCATGCAGGCA
TCTCAAGAGGGCTTGAAGAACTGACCCTGAAATACCATACAGCTCTTGATGTATCAGATCCCCTAGATTTGTCGAAAATA
GGAGATAGCTATCAAGAAGCGTTTTCTAAATTAAGAGAAAAAGAAATTGAGCGTGGTGTGACGCTGTCAGGGCCTCATCG
CGATGATGTTCTTTTCTATGTGAACGGACGCGATGTGCAGACGTATGGTTCTCAAGGACAGCAGCGAACGACGGCGTTGT
CCCTTAAGCTGGCGGAGATTGACCTGATCCATGAAGAAATCGGAGAATATCCCATTTTACTATTGGATGATGTACTGAGT
GAACTGGATGATTATCGCCAGTCACACTTGCTTCATACGATCCAAGGCCGTGTACAAACGTTTGTCACAACGACAAGCGT
TGATGGCATTGATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAAAATGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	100	100	1