Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | ACF2JY_RS20305 | Genome accession | NZ_CP172966 |
| Coordinates | 3909281..3909571 (+) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain cel | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3904281..3914571
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACF2JY_RS20290 (ACF2JY_20290) | yabE | 3904476..3905789 (-) | 1314 | WP_046380719.1 | ubiquitin-like domain-containing protein | - |
| ACF2JY_RS20295 (ACF2JY_20295) | dayD | 3905945..3906712 (-) | 768 | WP_014475570.1 | TatD family hydrolase | - |
| ACF2JY_RS20300 (ACF2JY_20300) | metG | 3906792..3908786 (-) | 1995 | WP_015382561.1 | methionine--tRNA ligase | - |
| ACF2JY_RS20305 (ACF2JY_20305) | abrB | 3909281..3909571 (+) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| ACF2JY_RS20310 (ACF2JY_20310) | rsmI | 3909620..3910498 (-) | 879 | WP_046380717.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| ACF2JY_RS20315 (ACF2JY_20315) | yazA | 3910473..3910772 (-) | 300 | WP_046380716.1 | GIY-YIG nuclease family protein | - |
| ACF2JY_RS20320 (ACF2JY_20320) | trmNF | 3910759..3911502 (-) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| ACF2JY_RS20325 (ACF2JY_20325) | yabA | 3911561..3911920 (-) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| ACF2JY_RS20330 (ACF2JY_20330) | ricT | 3911935..3912762 (-) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| ACF2JY_RS20335 (ACF2JY_20335) | holB | 3912765..3913754 (-) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| ACF2JY_RS20340 (ACF2JY_20340) | yaaR | 3913766..3914206 (-) | 441 | WP_009966249.1 | YaaR family protein | - |
| ACF2JY_RS20345 (ACF2JY_20345) | darA | 3914219..3914548 (-) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=1069750 ACF2JY_RS20305 WP_003226760.1 3909281..3909571(+) (abrB) [Bacillus subtilis strain cel]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=1069750 ACF2JY_RS20305 WP_003226760.1 3909281..3909571(+) (abrB) [Bacillus subtilis strain cel]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |