Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | ACF2JY_RS19975 | Genome accession | NZ_CP172966 |
| Coordinates | 3848406..3850838 (-) | Length | 810 a.a. |
| NCBI ID | WP_046380728.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain cel | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3843406..3855838
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACF2JY_RS19950 (ACF2JY_19950) | ispF | 3843453..3843929 (-) | 477 | WP_014475594.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| ACF2JY_RS19955 (ACF2JY_19955) | ispD | 3843922..3844620 (-) | 699 | WP_003235019.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| ACF2JY_RS19960 (ACF2JY_19960) | yacL | 3844635..3845735 (-) | 1101 | WP_003235014.1 | PIN/TRAM domain-containing protein | - |
| ACF2JY_RS19965 (ACF2JY_19965) | disA | 3845852..3846934 (-) | 1083 | WP_003225736.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| ACF2JY_RS19970 (ACF2JY_19970) | radA | 3846938..3848314 (-) | 1377 | WP_004399687.1 | DNA repair protein RadA | Machinery gene |
| ACF2JY_RS19975 (ACF2JY_19975) | clpC | 3848406..3850838 (-) | 2433 | WP_046380728.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| ACF2JY_RS19980 (ACF2JY_19980) | mcsB | 3850835..3851926 (-) | 1092 | WP_003235007.1 | protein arginine kinase | - |
| ACF2JY_RS19985 (ACF2JY_19985) | mcsA | 3851926..3852483 (-) | 558 | WP_015252993.1 | protein-arginine kinase activator protein McsA | - |
| ACF2JY_RS19990 (ACF2JY_19990) | ctsR | 3852497..3852961 (-) | 465 | WP_003225724.1 | transcriptional regulator CtsR | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90090.55 Da Isoelectric Point: 6.0253
>NTDB_id=1069749 ACF2JY_RS19975 WP_046380728.1 3848406..3850838(-) (clpC) [Bacillus subtilis strain cel]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGE
FVVKTTAKSN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGE
FVVKTTAKSN
Nucleotide
Download Length: 2433 bp
>NTDB_id=1069749 ACF2JY_RS19975 WP_046380728.1 3848406..3850838(-) (clpC) [Bacillus subtilis strain cel]
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTACTGGCGCTAGCACAGGAAGAAGCACTTCGGTTAGGTCATAA
TAACATTGGCACTGAGCATATTTTATTAGGACTGGTAAGAGAAGGAGAGGGCATTGCTGCTAAAGCTCTTCAAGCGCTTG
GACTCGGTTCAGATAAAATTCAGAAAGAAGTAGAAAGTTTGATTGGGCGCGGGCAGGAAATGTCTCAAACGATTCATTAT
ACTCCTAGAGCTAAAAAAGTCATTGAGCTTTCAATGGATGAGGCAAGAAAACTCGGTCATTCTTATGTGGGAACAGAACA
TATTCTTCTTGGTCTGATTCGTGAAGGAGAAGGTGTTGCTGCGAGAGTTCTGAATAATCTCGGTGTCAGCTTAAATAAAG
CAAGACAGCAGGTGCTCCAGCTTCTAGGAAGTAATGAAACAGGATCATCAGCGGCAGGAACAAACAGCAATGCGAATACG
CCTACGCTTGACAGCTTGGCAAGAGACTTAACTGCTATTGCGAAGGAAGACAGCCTTGACCCTGTAATCGGCAGAAGCAA
GGAGATCCAGCGTGTCATTGAAGTGTTAAGCCGCAGAACGAAAAACAACCCTGTTCTCATTGGGGAACCAGGTGTAGGTA
AAACGGCTATCGCAGAAGGTTTGGCACAGCAAATTATCAATAATGAAGTACCCGAAATTTTGCGTGATAAACGTGTGATG
ACATTAGACATGGGAACAGTTGTTGCCGGCACAAAATACCGCGGAGAATTTGAGGATCGCCTGAAGAAGGTCATGGATGA
AATTCGCCAGGCAGGAAATATCATTCTATTCATCGATGAGCTCCATACATTAATCGGGGCAGGCGGAGCAGAAGGTGCTA
TTGATGCATCTAATATTTTAAAACCTTCACTTGCTCGTGGCGAACTCCAATGTATTGGTGCAACGACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCAGCACTGGAACGCCGTTTTCAGCCGATTCAGGTTGATCAGCCATCTGTAGATGAAAG
TATTCAAATTTTACAAGGTCTGCGTGACAGATACGAAGCCCACCACCGCGTTTCTATCACTGATGATGCCATTGAAGCTG
CGGTTAAGCTTTCTGACAGATATATTTCTGACCGCTTCCTTCCGGATAAAGCAATTGACTTGATCGATGAAGCAGGTTCA
AAGGTGAGACTGCGCTCATTTACAACGCCTCCTAACTTAAAAGAGCTTGAGCAGAAGCTTGATGAGGTTCGTAAAGAGAA
GGATGCGGCAGTGCAAAGCCAAGAGTTTGAAAAAGCTGCTTCCTTGCGTGATACTGAACAACGCCTGCGCGAGCAAGTAG
AGGATACGAAGAAATCATGGAAAGAGAAGCAAGGGCAGGAAAACTCAGAGGTTACTGTGGATGATATTGCGATGGTTGTA
TCCAGCTGGACCGGTGTGCCTGTATCTAAAATCGCCCAAACTGAAACTGATAAGCTTCTCAATATGGAAAACATTCTTCA
TTCCCGCGTCATCGGCCAGGATGAAGCAGTTGTAGCTGTTGCAAAAGCCGTCAGACGTGCGAGAGCAGGATTGAAAGATC
CTAAACGCCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGTGTAGGTAAAACAGAGCTTGCACGAGCACTCGCTGAA
TCCATTTTTGGTGATGAAGAATCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCAACTTCAAGACTTGT
TGGTTCACCTCCGGGATATGTGGGATATGATGAAGGCGGTCAATTGACAGAGAAAGTCAGAAGAAAACCTTACTCTGTCG
TGCTTCTTGATGAGATCGAGAAAGCGCACCCTGATGTCTTCAATATCCTTCTGCAAGTTCTTGAAGACGGACGATTGACT
GATTCTAAAGGACGCACAGTCGATTTCCGCAATACCATTCTGATCATGACATCAAACGTCGGAGCAAGTGAGCTGAAACG
CAATAAATATGTCGGCTTTAACGTTCAGGATGAAACTCAAAATCATAAAGACATGAAAGATAAAGTGATGGGTGAATTAA
AACGAGCGTTCAGACCTGAGTTCATCAACCGTATCGATGAAATCATTGTCTTCCATTCACTTGAGAAAAAACATCTTACT
GAAATTGTGTCATTAATGTCTGATCAATTAACGAAACGCCTGAAAGAACAAGATCTTTCTATCGAATTGACAGATGCTGC
AAAAGCGAAAGTCGCGGAAGAGGGCGTTGACCTGGAATACGGTGCCCGTCCGTTAAGAAGAGCGATCCAAAAACATGTCG
AGGATCGTTTATCTGAAGAACTCCTCAGAGGAAATATTCATAAAGGACAGCATATTGTTCTTGATGTAGAAGATGGCGAA
TTTGTCGTAAAAACGACTGCTAAATCGAATTAA
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTACTGGCGCTAGCACAGGAAGAAGCACTTCGGTTAGGTCATAA
TAACATTGGCACTGAGCATATTTTATTAGGACTGGTAAGAGAAGGAGAGGGCATTGCTGCTAAAGCTCTTCAAGCGCTTG
GACTCGGTTCAGATAAAATTCAGAAAGAAGTAGAAAGTTTGATTGGGCGCGGGCAGGAAATGTCTCAAACGATTCATTAT
ACTCCTAGAGCTAAAAAAGTCATTGAGCTTTCAATGGATGAGGCAAGAAAACTCGGTCATTCTTATGTGGGAACAGAACA
TATTCTTCTTGGTCTGATTCGTGAAGGAGAAGGTGTTGCTGCGAGAGTTCTGAATAATCTCGGTGTCAGCTTAAATAAAG
CAAGACAGCAGGTGCTCCAGCTTCTAGGAAGTAATGAAACAGGATCATCAGCGGCAGGAACAAACAGCAATGCGAATACG
CCTACGCTTGACAGCTTGGCAAGAGACTTAACTGCTATTGCGAAGGAAGACAGCCTTGACCCTGTAATCGGCAGAAGCAA
GGAGATCCAGCGTGTCATTGAAGTGTTAAGCCGCAGAACGAAAAACAACCCTGTTCTCATTGGGGAACCAGGTGTAGGTA
AAACGGCTATCGCAGAAGGTTTGGCACAGCAAATTATCAATAATGAAGTACCCGAAATTTTGCGTGATAAACGTGTGATG
ACATTAGACATGGGAACAGTTGTTGCCGGCACAAAATACCGCGGAGAATTTGAGGATCGCCTGAAGAAGGTCATGGATGA
AATTCGCCAGGCAGGAAATATCATTCTATTCATCGATGAGCTCCATACATTAATCGGGGCAGGCGGAGCAGAAGGTGCTA
TTGATGCATCTAATATTTTAAAACCTTCACTTGCTCGTGGCGAACTCCAATGTATTGGTGCAACGACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCAGCACTGGAACGCCGTTTTCAGCCGATTCAGGTTGATCAGCCATCTGTAGATGAAAG
TATTCAAATTTTACAAGGTCTGCGTGACAGATACGAAGCCCACCACCGCGTTTCTATCACTGATGATGCCATTGAAGCTG
CGGTTAAGCTTTCTGACAGATATATTTCTGACCGCTTCCTTCCGGATAAAGCAATTGACTTGATCGATGAAGCAGGTTCA
AAGGTGAGACTGCGCTCATTTACAACGCCTCCTAACTTAAAAGAGCTTGAGCAGAAGCTTGATGAGGTTCGTAAAGAGAA
GGATGCGGCAGTGCAAAGCCAAGAGTTTGAAAAAGCTGCTTCCTTGCGTGATACTGAACAACGCCTGCGCGAGCAAGTAG
AGGATACGAAGAAATCATGGAAAGAGAAGCAAGGGCAGGAAAACTCAGAGGTTACTGTGGATGATATTGCGATGGTTGTA
TCCAGCTGGACCGGTGTGCCTGTATCTAAAATCGCCCAAACTGAAACTGATAAGCTTCTCAATATGGAAAACATTCTTCA
TTCCCGCGTCATCGGCCAGGATGAAGCAGTTGTAGCTGTTGCAAAAGCCGTCAGACGTGCGAGAGCAGGATTGAAAGATC
CTAAACGCCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGTGTAGGTAAAACAGAGCTTGCACGAGCACTCGCTGAA
TCCATTTTTGGTGATGAAGAATCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCAACTTCAAGACTTGT
TGGTTCACCTCCGGGATATGTGGGATATGATGAAGGCGGTCAATTGACAGAGAAAGTCAGAAGAAAACCTTACTCTGTCG
TGCTTCTTGATGAGATCGAGAAAGCGCACCCTGATGTCTTCAATATCCTTCTGCAAGTTCTTGAAGACGGACGATTGACT
GATTCTAAAGGACGCACAGTCGATTTCCGCAATACCATTCTGATCATGACATCAAACGTCGGAGCAAGTGAGCTGAAACG
CAATAAATATGTCGGCTTTAACGTTCAGGATGAAACTCAAAATCATAAAGACATGAAAGATAAAGTGATGGGTGAATTAA
AACGAGCGTTCAGACCTGAGTTCATCAACCGTATCGATGAAATCATTGTCTTCCATTCACTTGAGAAAAAACATCTTACT
GAAATTGTGTCATTAATGTCTGATCAATTAACGAAACGCCTGAAAGAACAAGATCTTTCTATCGAATTGACAGATGCTGC
AAAAGCGAAAGTCGCGGAAGAGGGCGTTGACCTGGAATACGGTGCCCGTCCGTTAAGAAGAGCGATCCAAAAACATGTCG
AGGATCGTTTATCTGAAGAACTCCTCAGAGGAAATATTCATAAAGGACAGCATATTGTTCTTGATGTAGAAGATGGCGAA
TTTGTCGTAAAAACGACTGCTAAATCGAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
99.753 |
100 |
0.998 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.499 |
99.012 |
0.5 |
| clpC | Streptococcus thermophilus LMD-9 |
46.368 |
100 |
0.473 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.126 |
100 |
0.47 |
| clpC | Streptococcus pneumoniae Rx1 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus pneumoniae D39 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus mutans UA159 |
43.462 |
100 |
0.443 |
| clpE | Streptococcus mutans UA159 |
53.313 |
80.123 |
0.427 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.664 |
87.778 |
0.427 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.308 |
80.247 |
0.42 |
| clpE | Streptococcus pneumoniae Rx1 |
52.308 |
80.247 |
0.42 |
| clpE | Streptococcus pneumoniae D39 |
52.308 |
80.247 |
0.42 |
| clpE | Streptococcus pneumoniae R6 |
52.308 |
80.247 |
0.42 |