Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   ACF2JY_RS18550 Genome accession   NZ_CP172966
Coordinates   3570502..3570642 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain cel     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 3565502..3575642
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF2JY_RS18545 (ACF2JY_18545) - 3569384..3570556 (-) 1173 Protein_3640 condensation domain-containing protein -
  ACF2JY_RS18550 (ACF2JY_18550) comS 3570502..3570642 (-) 141 WP_010886404.1 competence protein ComS Regulator
  ACF2JY_RS18555 (ACF2JY_18555) srfAB 3570734..3573778 (-) 3045 Protein_3642 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=1069744 ACF2JY_RS18550 WP_010886404.1 3570502..3570642(-) (comS) [Bacillus subtilis strain cel]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=1069744 ACF2JY_RS18550 WP_010886404.1 3570502..3570642(-) (comS) [Bacillus subtilis strain cel]
TTGAATCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains


Predicted by InterproScan.

(1-44)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment