Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   ACF2JY_RS15925 Genome accession   NZ_CP172966
Coordinates   3051946..3052740 (-) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain cel     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 3046946..3057740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF2JY_RS15890 (ACF2JY_15890) ephM 3047789..3048649 (-) 861 WP_014479220.1 epoxide hydrolase EphM -
  ACF2JY_RS15895 (ACF2JY_15895) spdL 3048651..3048968 (-) 318 WP_038428649.1 SdpC immunity protein SpdL -
  ACF2JY_RS15900 (ACF2JY_15900) yfhK 3049053..3049571 (-) 519 WP_029317456.1 SH3 domain-containing protein -
  ACF2JY_RS15905 (ACF2JY_15905) yfhJ 3049716..3049985 (-) 270 WP_015252516.1 YfhJ family protein -
  ACF2JY_RS15910 (ACF2JY_15910) sspK 3050110..3050262 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ACF2JY_RS15915 (ACF2JY_15915) yfhI 3050294..3051487 (-) 1194 WP_003243500.1 MFS transporter -
  ACF2JY_RS15920 (ACF2JY_15920) yfhH 3051630..3051944 (-) 315 WP_003244592.1 YfhH family protein -
  ACF2JY_RS15925 (ACF2JY_15925) recX 3051946..3052740 (-) 795 WP_029726844.1 recombination regulator RecX Regulator
  ACF2JY_RS15930 (ACF2JY_15930) yfhF 3052829..3053740 (+) 912 WP_033883295.1 TIGR01777 family oxidoreductase -
  ACF2JY_RS15935 (ACF2JY_15935) yfhE 3053795..3053905 (+) 111 WP_003223230.1 YfhE family protein -
  ACF2JY_RS15940 (ACF2JY_15940) yfhD 3053972..3054163 (+) 192 WP_003233561.1 YfhD family protein -
  ACF2JY_RS15945 (ACF2JY_15945) yfhC 3054202..3054786 (-) 585 WP_032723010.1 nitroreductase -
  ACF2JY_RS15950 (ACF2JY_15950) yfhB 3054874..3055755 (-) 882 WP_046380867.1 PhzF family phenazine biosynthesis isomerase -
  ACF2JY_RS15955 (ACF2JY_15955) sxzA 3055870..3056901 (-) 1032 WP_003243057.1 iron chelate uptake ABC transporter family permease subunit -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=1069734 ACF2JY_RS15925 WP_029726844.1 3051946..3052740(-) (recX) [Bacillus subtilis strain cel]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1069734 ACF2JY_RS15925 WP_029726844.1 3051946..3052740(-) (recX) [Bacillus subtilis strain cel]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTTTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains


Predicted by InterproScan.

(84-204)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996


Multiple sequence alignment