Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   ACF2JY_RS14255 Genome accession   NZ_CP172966
Coordinates   2745903..2747024 (-) Length   373 a.a.
NCBI ID   WP_003232938.1    Uniprot ID   -
Organism   Bacillus subtilis strain cel     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 2740903..2752024
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF2JY_RS14230 (ACF2JY_14230) cwlQ 2741042..2741776 (+) 735 WP_046380936.1 bifunctional muramidase/murein lytic transglycosylase -
  ACF2JY_RS14235 (ACF2JY_14235) bhbI 2742031..2742429 (+) 399 WP_046380935.1 thiol management oxidoreductase -
  ACF2JY_RS14240 (ACF2JY_14240) spxH 2742426..2743325 (+) 900 WP_024573348.1 protease adaptor protein SpxH -
  ACF2JY_RS14245 (ACF2JY_14245) - 2743639..2743806 (+) 168 WP_003244944.1 hypothetical protein -
  ACF2JY_RS14250 (ACF2JY_14250) pepF 2743844..2745673 (-) 1830 WP_173401378.1 oligoendopeptidase F -
  ACF2JY_RS14255 (ACF2JY_14255) coiA 2745903..2747024 (-) 1122 WP_003232938.1 competence protein CoiA Machinery gene
  ACF2JY_RS14260 (ACF2JY_14260) - 2747098..2747220 (+) 123 WP_003245684.1 hypothetical protein -
  ACF2JY_RS14265 (ACF2JY_14265) mecA 2747215..2747871 (-) 657 WP_003245194.1 adaptor protein MecA Regulator
  ACF2JY_RS14270 (ACF2JY_14270) - 2747838..2747978 (-) 141 WP_119122854.1 hypothetical protein -
  ACF2JY_RS14275 (ACF2JY_14275) yjbE 2748148..2748804 (+) 657 WP_003232944.1 TerC family protein -
  ACF2JY_RS14280 (ACF2JY_14280) spx 2748847..2749242 (-) 396 WP_014476435.1 transcriptional regulator Spx -
  ACF2JY_RS14285 (ACF2JY_14285) yjbC 2749423..2750001 (-) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  ACF2JY_RS14290 (ACF2JY_14290) yjbB 2750166..2751383 (-) 1218 WP_080478438.1 MFS transporter -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43735.78 Da        Isoelectric Point: 10.1187

>NTDB_id=1069721 ACF2JY_RS14255 WP_003232938.1 2745903..2747024(-) (coiA) [Bacillus subtilis strain cel]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKETNRL
RLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=1069721 ACF2JY_RS14255 WP_003232938.1 2745903..2747024(-) (coiA) [Bacillus subtilis strain cel]
CTGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCTCCATAGACATCGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACACAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGGATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAACAAATCGCCTT
AGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGGTAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTTTGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

99.196

100

0.992


Multiple sequence alignment