Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACF2JY_RS12790 Genome accession   NZ_CP172966
Coordinates   2485798..2486373 (-) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain cel     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2480798..2491373
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF2JY_RS12765 (ACF2JY_12765) mobB 2481194..2481715 (-) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  ACF2JY_RS12770 (ACF2JY_12770) glp 2481676..2482968 (-) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  ACF2JY_RS12775 (ACF2JY_12775) moeB 2482986..2484005 (-) 1020 WP_032721477.1 molybdopterin-synthase adenylyltransferase MoeB -
  ACF2JY_RS12780 (ACF2JY_12780) mobA 2484056..2484655 (-) 600 WP_024571969.1 molybdenum cofactor guanylyltransferase -
  ACF2JY_RS12785 (ACF2JY_12785) cse15 2484792..2485757 (+) 966 WP_024571970.1 spore protein Cse15 -
  ACF2JY_RS12790 (ACF2JY_12790) rok 2485798..2486373 (-) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  ACF2JY_RS12795 (ACF2JY_12795) ykuV 2486839..2487285 (-) 447 WP_024571971.1 thiol-disulfide oxidoreductase YkuV -
  ACF2JY_RS12800 (ACF2JY_12800) ahpA 2487355..2487897 (-) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  ACF2JY_RS12805 (ACF2JY_12805) mscT 2488134..2488937 (+) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  ACF2JY_RS12810 (ACF2JY_12810) ykuS 2488974..2489219 (-) 246 WP_003232382.1 YkuS family protein -
  ACF2JY_RS12815 (ACF2JY_12815) dapI 2489281..2490405 (-) 1125 WP_046380993.1 N-acetyldiaminopimelate deacetylase -
  ACF2JY_RS12820 (ACF2JY_12820) dapD 2490475..2491185 (-) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=1069716 ACF2JY_RS12790 WP_003232378.1 2485798..2486373(-) (rok) [Bacillus subtilis strain cel]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=1069716 ACF2JY_RS12790 WP_003232378.1 2485798..2486373(-) (rok) [Bacillus subtilis strain cel]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment