Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | ACF2JY_RS08185 | Genome accession | NZ_CP172966 |
| Coordinates | 1549578..1550615 (+) | Length | 345 a.a. |
| NCBI ID | WP_029317912.1 | Uniprot ID | A0A162U359 |
| Organism | Bacillus subtilis strain cel | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1544578..1555615
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACF2JY_RS08160 (ACF2JY_08160) | rsbRD | 1544797..1545633 (+) | 837 | WP_046381180.1 | RsbT co-antagonist protein RsbRD | - |
| ACF2JY_RS08165 (ACF2JY_08165) | yqhB | 1545686..1547014 (-) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| ACF2JY_RS08170 (ACF2JY_08170) | corA | 1547157..1548110 (+) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| ACF2JY_RS08175 (ACF2JY_08175) | - | 1548112..1548309 (+) | 198 | WP_014480259.1 | CBS domain-containing protein | - |
| ACF2JY_RS08180 (ACF2JY_08180) | comGA | 1548521..1549591 (+) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| ACF2JY_RS08185 (ACF2JY_08185) | comGB | 1549578..1550615 (+) | 1038 | WP_029317912.1 | comG operon protein ComGB | Machinery gene |
| ACF2JY_RS08190 (ACF2JY_08190) | comGC | 1550629..1550925 (+) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| ACF2JY_RS08195 (ACF2JY_08195) | comGD | 1550915..1551346 (+) | 432 | WP_046381179.1 | comG operon protein ComGD | Machinery gene |
| ACF2JY_RS08200 (ACF2JY_08200) | comGE | 1551330..1551677 (+) | 348 | WP_046381178.1 | ComG operon protein 5 | Machinery gene |
| ACF2JY_RS08205 (ACF2JY_08205) | comGF | 1551703..1552086 (+) | 384 | WP_046160582.1 | ComG operon protein ComGF | Machinery gene |
| ACF2JY_RS08210 (ACF2JY_08210) | comGG | 1552087..1552461 (+) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| ACF2JY_RS08215 (ACF2JY_08215) | spoIITA | 1552533..1552712 (+) | 180 | WP_029726723.1 | YqzE family protein | - |
| ACF2JY_RS08220 (ACF2JY_08220) | yqzG | 1552754..1553080 (-) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| ACF2JY_RS08225 (ACF2JY_08225) | tapA | 1553352..1554113 (+) | 762 | WP_003230180.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ACF2JY_RS08230 (ACF2JY_08230) | sipW | 1554097..1554669 (+) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| ACF2JY_RS08235 (ACF2JY_08235) | tasA | 1554733..1555518 (+) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39662.10 Da Isoelectric Point: 9.7153
>NTDB_id=1069700 ACF2JY_RS08185 WP_029317912.1 1549578..1550615(+) (comGB) [Bacillus subtilis strain cel]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=1069700 ACF2JY_RS08185 WP_029317912.1 1549578..1550615(+) (comGB) [Bacillus subtilis strain cel]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGCCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGCCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.381 |
93.623 |
0.93 |