Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ACF1RT_RS07675 Genome accession   NZ_CP172847
Coordinates   1543550..1544590 (-) Length   346 a.a.
NCBI ID   WP_002264420.1    Uniprot ID   -
Organism   Streptococcus mutans strain DPC6143     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1538550..1549590
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF1RT_RS07655 (ACF1RT_07655) - 1539983..1540519 (-) 537 WP_226710897.1 VanZ family protein -
  ACF1RT_RS07660 (ACF1RT_07660) rlmN 1540519..1541604 (-) 1086 WP_002264424.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  ACF1RT_RS07665 (ACF1RT_07665) - 1541601..1542149 (-) 549 WP_002264423.1 YutD-like domain-containing protein -
  ACF1RT_RS07670 (ACF1RT_07670) - 1542146..1543477 (-) 1332 WP_002264422.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  ACF1RT_RS07675 (ACF1RT_07675) sepM 1543550..1544590 (-) 1041 WP_002264420.1 S16 family serine protease SepM Regulator
  ACF1RT_RS07680 (ACF1RT_07680) coaD 1544568..1545068 (-) 501 WP_002264419.1 pantetheine-phosphate adenylyltransferase -
  ACF1RT_RS07685 (ACF1RT_07685) rsmD 1545058..1545597 (-) 540 WP_002264418.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ACF1RT_RS07690 (ACF1RT_07690) - 1546180..1547955 (-) 1776 WP_019313107.1 oleate hydratase -
  ACF1RT_RS07695 (ACF1RT_07695) - 1548076..1548642 (-) 567 WP_002279620.1 TetR/AcrR family transcriptional regulator -
  ACF1RT_RS07700 (ACF1RT_07700) - 1548838..1549083 (-) 246 Protein_1482 bacteriocin-type signal sequence -
  ACF1RT_RS07705 (ACF1RT_07705) - 1549124..1549327 (-) 204 WP_002270141.1 hypothetical protein -

Sequence


Protein


Download         Length: 346 a.a.        Molecular weight: 37952.90 Da        Isoelectric Point: 10.1655

>NTDB_id=1069102 ACF1RT_RS07675 WP_002264420.1 1543550..1544590(-) (sepM) [Streptococcus mutans strain DPC6143]
MKTNKKFKWWLISGISLILLLMVFFFPLPYYLEMPGGAYDIRSVVTVNHKEDKEKGSYNFVAVSLSKATPIQVLYAWLTP
FTEITSAKETTGGVSDADYMRINQFYMETSQNGAIYKALSLAHKKASFNYMGVYVLQVSKNSTFKGVLNIADTVTGVNDK
TFHSSKELIKYVSGLKLGSKVSVQYTSENKKKTAKGKVIKLSNGKNGIGIGLVDHTKVTSDDKIEFSTNGIGGPSAGLMF
TLDIYDQLVKEDLRKGRIIAGTGTIGEDGSVGDIGGADMKVAAADRINADIFFVPNNPVSKATLKKNPKALTNYQEAKQA
AKKLGTKMKIVPVKNVQEAIDYLRKH

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=1069102 ACF1RT_RS07675 WP_002264420.1 1543550..1544590(-) (sepM) [Streptococcus mutans strain DPC6143]
GTGAAAACAAACAAAAAATTTAAATGGTGGCTAATCAGCGGTATCAGTCTTATTTTGCTTTTAATGGTATTCTTTTTTCC
TCTTCCTTACTATTTAGAAATGCCCGGCGGAGCCTATGATATTCGTTCTGTTGTGACGGTTAATCATAAAGAAGATAAAG
AGAAAGGATCTTATAATTTTGTAGCTGTCTCTCTTAGTAAGGCAACCCCCATACAAGTCCTCTATGCTTGGTTGACCCCT
TTTACAGAAATTACCAGTGCCAAGGAAACAACTGGTGGTGTTAGTGATGCGGATTATATGAGGATTAATCAGTTTTATAT
GGAAACCTCACAAAATGGAGCTATCTATAAAGCTCTTTCTTTAGCACATAAAAAGGCAAGCTTTAATTATATGGGTGTTT
ATGTTTTGCAGGTTAGTAAGAATTCAACTTTTAAGGGAGTTTTAAATATTGCTGATACTGTAACAGGCGTTAATGACAAG
ACCTTTCATAGTTCAAAAGAATTGATTAAATATGTGTCTGGACTGAAATTAGGCAGCAAGGTCAGTGTTCAATATACTTC
TGAAAATAAGAAGAAAACAGCCAAGGGCAAAGTTATTAAATTGTCAAATGGCAAAAATGGTATTGGCATTGGCTTGGTTG
ATCATACCAAGGTCACTTCTGATGATAAAATCGAATTTAGCACAAATGGTATTGGAGGGCCAAGTGCCGGTCTCATGTTT
ACCCTTGATATTTACGATCAACTAGTGAAAGAGGACTTACGTAAGGGTCGTATTATTGCAGGTACTGGTACTATTGGAGA
AGACGGGTCTGTTGGGGATATTGGCGGTGCTGATATGAAAGTGGCAGCAGCAGATAGGATTAATGCAGATATCTTTTTTG
TTCCCAATAATCCTGTAAGTAAGGCAACTTTGAAAAAAAATCCCAAAGCTCTCACTAATTATCAAGAAGCTAAGCAGGCT
GCTAAAAAATTAGGCACTAAGATGAAGATTGTCCCTGTTAAAAATGTGCAGGAGGCTATTGATTACCTAAGAAAACACTA
A

Domains


Predicted by InterproScan.

(131-195)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

99.711

100

0.997


Multiple sequence alignment