Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACHQIQ_RS17075 Genome accession   NZ_CP172778
Coordinates   3486327..3486923 (-) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain BATC1     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3481327..3491923
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHQIQ_RS17060 (ACHQIQ_17075) helD 3481535..3483589 (-) 2055 WP_065811525.1 DNA helicase IV -
  ACHQIQ_RS17065 (ACHQIQ_17080) - 3483714..3484160 (+) 447 WP_002898425.1 YccF domain-containing protein -
  ACHQIQ_RS17070 (ACHQIQ_17085) yccS 3484178..3486313 (+) 2136 WP_021465041.1 YccS family putative transporter -
  ACHQIQ_RS17075 (ACHQIQ_17090) sxy/tfoX 3486327..3486923 (-) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  ACHQIQ_RS17080 (ACHQIQ_17095) sulA 3487272..3487781 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  ACHQIQ_RS17085 (ACHQIQ_17100) ompA 3488134..3489198 (+) 1065 WP_064278948.1 porin OmpA -
  ACHQIQ_RS17090 (ACHQIQ_17105) matP 3489330..3489782 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACHQIQ_RS17095 (ACHQIQ_17110) - 3489968..3491725 (+) 1758 WP_210711409.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=1068846 ACHQIQ_RS17075 WP_004179217.1 3486327..3486923(-) (sxy/tfoX) [Klebsiella pneumoniae strain BATC1]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1068846 ACHQIQ_RS17075 WP_004179217.1 3486327..3486923(-) (sxy/tfoX) [Klebsiella pneumoniae strain BATC1]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment