Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACHQIX_RS15750 Genome accession   NZ_CP172753
Coordinates   3232541..3233137 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain DCC2     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3227541..3238137
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHQIX_RS15735 (ACHQIX_15745) helD 3227749..3229803 (-) 2055 WP_115196889.1 DNA helicase IV -
  ACHQIX_RS15740 (ACHQIX_15750) - 3229928..3230374 (+) 447 WP_002898425.1 YccF domain-containing protein -
  ACHQIX_RS15745 (ACHQIX_15755) yccS 3230392..3232527 (+) 2136 WP_411173601.1 YccS family putative transporter -
  ACHQIX_RS15750 (ACHQIX_15760) sxy/tfoX 3232541..3233137 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  ACHQIX_RS15755 (ACHQIX_15765) sulA 3233486..3233995 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  ACHQIX_RS15760 (ACHQIX_15770) ompA 3234348..3235418 (+) 1071 WP_002898408.1 porin OmpA -
  ACHQIX_RS15765 (ACHQIX_15775) matP 3235550..3236002 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACHQIX_RS15770 (ACHQIX_15780) - 3236188..3237945 (+) 1758 WP_226325892.1 AAA family ATPase -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=1068685 ACHQIX_RS15750 WP_004150836.1 3232541..3233137(-) (sxy/tfoX) [Klebsiella pneumoniae strain DCC2]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1068685 ACHQIX_RS15750 WP_004150836.1 3232541..3233137(-) (sxy/tfoX) [Klebsiella pneumoniae strain DCC2]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment