Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACHQI0_RS17365 Genome accession   NZ_CP172747
Coordinates   3470930..3471526 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain FRC1     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3465930..3476526
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHQI0_RS17350 (ACHQI0_17370) helD 3466138..3468192 (-) 2055 WP_004179218.1 DNA helicase IV -
  ACHQI0_RS17355 (ACHQI0_17375) - 3468317..3468763 (+) 447 WP_002898425.1 YccF domain-containing protein -
  ACHQI0_RS17360 (ACHQI0_17380) yccS 3468781..3470916 (+) 2136 WP_021465041.1 YccS family putative transporter -
  ACHQI0_RS17365 (ACHQI0_17385) sxy/tfoX 3470930..3471526 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  ACHQI0_RS17370 (ACHQI0_17390) sulA 3471875..3472384 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  ACHQI0_RS17375 (ACHQI0_17395) ompA 3472737..3473807 (+) 1071 WP_099451225.1 porin OmpA -
  ACHQI0_RS17380 (ACHQI0_17400) matP 3473939..3474391 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACHQI0_RS17385 (ACHQI0_17405) - 3474577..3476334 (+) 1758 WP_016529118.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=1068613 ACHQI0_RS17365 WP_004150836.1 3470930..3471526(-) (sxy/tfoX) [Klebsiella pneumoniae strain FRC1]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1068613 ACHQI0_RS17365 WP_004150836.1 3470930..3471526(-) (sxy/tfoX) [Klebsiella pneumoniae strain FRC1]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment