Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   ACFVP7_RS14185 Genome accession   NZ_CP172606
Coordinates   2685707..2686474 (-) Length   255 a.a.
NCBI ID   WP_014477369.1    Uniprot ID   A0A0D1L7G7
Organism   Bacillus sp. SG20033     
Function   ssDNA annealing; plasmid transformation (predicted from homology)   
DNA processing Homologous recombination

Genomic Context

Location: 2680707..2691474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFVP7_RS14165 (ACFVP7_14165) - 2680881..2681693 (-) 813 WP_003230064.1 pyruvate, water dikinase regulatory protein -
  ACFVP7_RS14170 (ACFVP7_14170) ccpN 2681719..2682357 (-) 639 WP_003237058.1 transcriptional regulator CcpN -
  ACFVP7_RS14175 (ACFVP7_14175) glyS 2682490..2684529 (-) 2040 WP_338730589.1 glycine--tRNA ligase subunit beta -
  ACFVP7_RS14180 (ACFVP7_14180) glyQ 2684522..2685409 (-) 888 WP_003226213.1 glycine--tRNA ligase subunit alpha -
  ACFVP7_RS14185 (ACFVP7_14185) recO 2685707..2686474 (-) 768 WP_014477369.1 DNA repair protein RecO Machinery gene
  ACFVP7_RS14190 (ACFVP7_14190) - 2686511..2686654 (-) 144 WP_003230053.1 YqzL family protein -
  ACFVP7_RS14195 (ACFVP7_14195) era 2686802..2687707 (-) 906 WP_003230051.1 GTPase Era -
  ACFVP7_RS14200 (ACFVP7_14200) - 2687688..2688097 (-) 410 Protein_2751 cytidine deaminase -
  ACFVP7_RS14205 (ACFVP7_14205) - 2688216..2688587 (-) 372 WP_015384119.1 diacylglycerol kinase family protein -
  ACFVP7_RS14210 (ACFVP7_14210) ybeY 2688568..2689041 (-) 474 WP_003230039.1 rRNA maturation RNase YbeY -
  ACFVP7_RS14215 (ACFVP7_14215) pgpH 2689042..2691177 (-) 2136 WP_116316530.1 cyclic-di-AMP phosphodiesterase PgpH -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29342.05 Da        Isoelectric Point: 8.3080

>NTDB_id=1068313 ACFVP7_RS14185 WP_014477369.1 2685707..2686474(-) (recO) [Bacillus sp. SG20033]
MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVSQPFLYGSFLMQKTSGLGTLQQGEMILSMRG
IREDLFLTAYAAYIAELVDRGTEEKKPNPYLFEFILESLKQLNEGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSQDG
TFHFSVRDNGFICHRCFEKDPYRIPIKPQTARLLRLFYYFDLSRLGNVSLKEETKAELKQVIDLYYEEYSGLYLKSKRFL
DQMESMKHLMGENKS

Nucleotide


Download         Length: 768 bp        

>NTDB_id=1068313 ACFVP7_RS14185 WP_014477369.1 2685707..2686474(-) (recO) [Bacillus sp. SG20033]
ATGCTGACAAAATGTGAAGGAATCGTTCTTCGCACAAATGATTACGGAGAGACGAATAAAATCGTAACATTACTGACAAG
AGAACACGGAAAAATAGGTGTTATGGCACGAGGCGCCAAAAAACCGAACAGCCGTTTATCAGCAGTCAGCCAGCCCTTTT
TGTATGGTTCTTTCTTAATGCAAAAAACATCGGGCCTCGGAACGCTTCAGCAGGGGGAAATGATCCTCAGCATGAGAGGC
ATCAGGGAAGACTTGTTTTTAACAGCATATGCTGCCTATATTGCTGAGTTAGTCGACAGAGGCACAGAAGAAAAAAAGCC
AAATCCTTATTTATTTGAATTCATATTAGAATCATTAAAACAGCTGAATGAAGGAACAGATCCGGATGTTATCACCTTCA
TTGTTCAAATGAAGATGCTCGGTGTCATGGGCCTGTATCCTGAGCTAAATCATTGTGTACATTGTAAAAGCCAAGACGGA
ACCTTTCATTTTTCTGTTCGTGATAATGGTTTTATATGCCACCGCTGTTTTGAAAAAGATCCTTACAGGATACCGATTAA
ACCGCAAACGGCAAGGCTGTTAAGACTCTTTTACTATTTTGATCTGTCGAGGCTCGGCAATGTGTCCTTAAAAGAGGAAA
CAAAAGCTGAATTAAAGCAAGTGATTGATTTATATTACGAAGAATATTCGGGATTGTATTTAAAATCAAAGCGCTTTTTA
GATCAAATGGAAAGCATGAAACATCTTATGGGTGAAAACAAAAGTTGA

Domains

Predicted by InterproScan.

Recombination protein O N terminal (RecO_N)

(1-75)

Recombination protein O C terminal (RecO_C)

(82-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L7G7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Bacillus subtilis subsp. subtilis str. 168

99.608

100

0.996

Multiple sequence alignment