Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | ACFVP7_RS13910 | Genome accession | NZ_CP172606 |
| Coordinates | 2635660..2636697 (-) | Length | 345 a.a. |
| NCBI ID | WP_338730579.1 | Uniprot ID | - |
| Organism | Bacillus sp. SG20033 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2630660..2641697
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFVP7_RS13860 (ACFVP7_13860) | tasA | 2630757..2631542 (-) | 786 | WP_072175550.1 | biofilm matrix protein TasA | - |
| ACFVP7_RS13865 (ACFVP7_13865) | sipW | 2631606..2632178 (-) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| ACFVP7_RS13870 (ACFVP7_13870) | tapA | 2632162..2632923 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ACFVP7_RS13875 (ACFVP7_13875) | - | 2633195..2633521 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| ACFVP7_RS13880 (ACFVP7_13880) | - | 2633563..2633742 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| ACFVP7_RS13885 (ACFVP7_13885) | comGG | 2633814..2634188 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| ACFVP7_RS13890 (ACFVP7_13890) | comGF | 2634189..2634572 (-) | 384 | WP_046160582.1 | ComG operon protein ComGF | Machinery gene |
| ACFVP7_RS13895 (ACFVP7_13895) | comGE | 2634598..2634945 (-) | 348 | WP_046381178.1 | ComG operon protein 5 | Machinery gene |
| ACFVP7_RS13900 (ACFVP7_13900) | comGD | 2634929..2635360 (-) | 432 | WP_046381179.1 | comG operon protein ComGD | Machinery gene |
| ACFVP7_RS13905 (ACFVP7_13905) | comGC | 2635350..2635646 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| ACFVP7_RS13910 (ACFVP7_13910) | comGB | 2635660..2636697 (-) | 1038 | WP_338730579.1 | comG operon protein ComGB | Machinery gene |
| ACFVP7_RS13915 (ACFVP7_13915) | comGA | 2636684..2637754 (-) | 1071 | WP_015714258.1 | competence protein ComGA | Machinery gene |
| ACFVP7_RS13920 (ACFVP7_13920) | corA | 2638166..2639119 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| ACFVP7_RS13925 (ACFVP7_13925) | - | 2639262..2640590 (+) | 1329 | WP_375059921.1 | hemolysin family protein | - |
| ACFVP7_RS13930 (ACFVP7_13930) | rsbRD | 2640643..2641479 (-) | 837 | WP_015714260.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39778.21 Da Isoelectric Point: 9.6257
>NTDB_id=1068311 ACFVP7_RS13910 WP_338730579.1 2635660..2636697(-) (comGB) [Bacillus sp. SG20033]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGTPFYQVLKSLSFHKEALGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGTPFYQVLKSLSFHKEALGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=1068311 ACFVP7_RS13910 WP_338730579.1 2635660..2636697(-) (comGB) [Bacillus sp. SG20033]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGACTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCTTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCGGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGACTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGACTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCTTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCGGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGACTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
98.762 |
93.623 |
0.925 |