Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   ACFVP7_RS13660 Genome accession   NZ_CP172606
Coordinates   2595699..2596502 (-) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus sp. SG20033     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2590699..2601502
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFVP7_RS13635 (ACFVP7_13635) - 2591837..2592567 (-) 731 Protein_2639 glycerophosphodiester phosphodiesterase -
  ACFVP7_RS13640 (ACFVP7_13640) - 2592646..2593266 (-) 621 WP_072173938.1 N-acetylmuramoyl-L-alanine amidase -
  ACFVP7_RS13645 (ACFVP7_13645) - 2593286..2593582 (-) 297 WP_014480225.1 hypothetical protein -
  ACFVP7_RS13650 (ACFVP7_13650) - 2593890..2594042 (+) 153 WP_122060483.1 hypothetical protein -
  ACFVP7_RS13655 (ACFVP7_13655) - 2594115..2595233 (+) 1119 WP_017696437.1 NADH-dependent flavin oxidoreductase -
  ACFVP7_RS13660 (ACFVP7_13660) spo0A 2595699..2596502 (-) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  ACFVP7_RS13665 (ACFVP7_13665) spoIVB 2596778..2598058 (-) 1281 WP_004398697.1 SpoIVB peptidase -
  ACFVP7_RS13670 (ACFVP7_13670) recN 2598233..2599963 (-) 1731 WP_167559478.1 DNA repair protein RecN Machinery gene
  ACFVP7_RS13675 (ACFVP7_13675) argR 2600000..2600449 (-) 450 WP_003230265.1 arginine repressor ArgR -
  ACFVP7_RS13680 (ACFVP7_13680) - 2600547..2601392 (-) 846 WP_396582298.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=1068302 ACFVP7_RS13660 WP_003226427.1 2595699..2596502(-) (spo0A) [Bacillus sp. SG20033]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1068302 ACFVP7_RS13660 WP_003226427.1 2595699..2596502(-) (spo0A) [Bacillus sp. SG20033]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTAAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATTTAGACGGACTTGCGGTTTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGGCAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCGCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCCCATATTAAAGGCTATCTCTATTTGCGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTCAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGCCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGTTGTTTGGTTATACTGTC
AGCATGACAAAAGCTAAACCTACCAACAGTGAATTCATTGCAATGGTTGCGGATAAGCTGAGGTTAGAGCATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment