Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACFVP7_RS08345 Genome accession   NZ_CP172606
Coordinates   1561716..1562291 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus sp. SG20033     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1556716..1567291
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFVP7_RS08315 (ACFVP7_08315) dapD 1556903..1557613 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ACFVP7_RS08320 (ACFVP7_08320) - 1557683..1558807 (+) 1125 WP_106073886.1 N-acetyldiaminopimelate deacetylase -
  ACFVP7_RS08325 (ACFVP7_08325) - 1558869..1559114 (+) 246 WP_003232382.1 YkuS family protein -
  ACFVP7_RS08330 (ACFVP7_08330) mscT 1559151..1559954 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  ACFVP7_RS08335 (ACFVP7_08335) ahpA 1560191..1560733 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  ACFVP7_RS08340 (ACFVP7_08340) ykuV 1560804..1561250 (+) 447 WP_024571971.1 thiol-disulfide oxidoreductase YkuV -
  ACFVP7_RS08345 (ACFVP7_08345) rok 1561716..1562291 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  ACFVP7_RS08350 (ACFVP7_08350) cse15 1562332..1563297 (-) 966 WP_024571970.1 spore protein Cse15 -
  ACFVP7_RS08355 (ACFVP7_08355) - 1563434..1564033 (+) 600 WP_338733571.1 molybdenum cofactor guanylyltransferase -
  ACFVP7_RS08360 (ACFVP7_08360) - 1564084..1565103 (+) 1020 WP_017696813.1 molybdopterin-synthase adenylyltransferase MoeB -
  ACFVP7_RS08365 (ACFVP7_08365) glp 1565121..1566413 (+) 1293 WP_124059810.1 gephyrin-like molybdotransferase Glp -
  ACFVP7_RS08370 (ACFVP7_08370) mobB 1566374..1566895 (+) 522 WP_338733576.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=1068294 ACFVP7_RS08345 WP_003232378.1 1561716..1562291(+) (rok) [Bacillus sp. SG20033]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=1068294 ACFVP7_RS08345 WP_003232378.1 1561716..1562291(+) (rok) [Bacillus sp. SG20033]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment