Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACFVP7_RS08245 Genome accession   NZ_CP172606
Coordinates   1545869..1546333 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus sp. SG20033     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1540869..1551333
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFVP7_RS08225 (ACFVP7_08225) kinA 1541336..1543156 (+) 1821 WP_338733554.1 sporulation histidine kinase KinA -
  ACFVP7_RS08230 (ACFVP7_08230) - 1543167..1544348 (-) 1182 WP_338733556.1 aminotransferase A -
  ACFVP7_RS08235 (ACFVP7_08235) - 1544550..1544711 (-) 162 WP_014476654.1 hypothetical protein -
  ACFVP7_RS08240 (ACFVP7_08240) cheV 1544914..1545825 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  ACFVP7_RS08245 (ACFVP7_08245) kre 1545869..1546333 (-) 465 WP_003232406.1 YkyB family protein Regulator
  ACFVP7_RS08250 (ACFVP7_08250) - 1546459..1547751 (-) 1293 WP_003245267.1 MFS transporter -
  ACFVP7_RS08255 (ACFVP7_08255) - 1547827..1548321 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  ACFVP7_RS08260 (ACFVP7_08260) - 1548378..1549238 (-) 861 WP_338733560.1 metallophosphoesterase -
  ACFVP7_RS08265 (ACFVP7_08265) fadH 1549381..1550145 (+) 765 WP_338733561.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=1068293 ACFVP7_RS08245 WP_003232406.1 1545869..1546333(-) (kre) [Bacillus sp. SG20033]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1068293 ACFVP7_RS08245 WP_003232406.1 1545869..1546333(-) (kre) [Bacillus sp. SG20033]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment