Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   ACFVP7_RS06295 Genome accession   NZ_CP172606
Coordinates   1216703..1217854 (+) Length   383 a.a.
NCBI ID   WP_338733219.1    Uniprot ID   -
Organism   Bacillus sp. SG20033     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1211703..1222854
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFVP7_RS06260 (ACFVP7_06260) - 1212162..1213381 (+) 1220 Protein_1168 MFS transporter -
  ACFVP7_RS06265 (ACFVP7_06265) - 1213544..1214122 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  ACFVP7_RS06270 (ACFVP7_06270) spx 1214303..1214698 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  ACFVP7_RS06275 (ACFVP7_06275) - 1214953..1215609 (-) 657 WP_338733216.1 TerC family protein -
  ACFVP7_RS06280 (ACFVP7_06280) - 1215779..1215919 (+) 141 WP_119122854.1 hypothetical protein -
  ACFVP7_RS06285 (ACFVP7_06285) mecA 1215886..1216542 (+) 657 WP_003239278.1 adaptor protein MecA Regulator
  ACFVP7_RS06290 (ACFVP7_06290) - 1216537..1216659 (-) 123 WP_021479547.1 hypothetical protein -
  ACFVP7_RS06295 (ACFVP7_06295) coiA 1216703..1217854 (+) 1152 WP_338733219.1 competence protein CoiA Machinery gene
  ACFVP7_RS06300 (ACFVP7_06300) pepF 1218084..1219911 (+) 1828 Protein_1176 oligoendopeptidase F -
  ACFVP7_RS06305 (ACFVP7_06305) - 1219949..1220116 (-) 168 WP_003244944.1 hypothetical protein -
  ACFVP7_RS06310 (ACFVP7_06310) spxH 1220430..1221329 (-) 900 WP_024573348.1 protease adaptor protein SpxH -
  ACFVP7_RS06315 (ACFVP7_06315) - 1221326..1221724 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  ACFVP7_RS06320 (ACFVP7_06320) cwlQ 1221979..1222713 (-) 735 WP_338733223.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44769.82 Da        Isoelectric Point: 9.9495

>NTDB_id=1068289 ACFVP7_RS06295 WP_338733219.1 1216703..1217854(+) (coiA) [Bacillus sp. SG20033]
MFSAVTEDGQMFHLLGAQQNQNLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFITDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=1068289 ACFVP7_RS06295 WP_338733219.1 1216703..1217854(+) (coiA) [Bacillus sp. SG20033]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAACTTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGTTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TAACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTTGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.66

97.389

0.961


Multiple sequence alignment