Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACFVP7_RS04650 Genome accession   NZ_CP172606
Coordinates   914337..915128 (+) Length   263 a.a.
NCBI ID   WP_072176012.1    Uniprot ID   -
Organism   Bacillus sp. SG20033     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 909337..920128
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFVP7_RS04620 (ACFVP7_04620) - 910176..911207 (+) 1032 WP_003243057.1 iron chelate uptake ABC transporter family permease subunit -
  ACFVP7_RS04625 (ACFVP7_04625) - 911322..912203 (+) 882 WP_396583031.1 PhzF family phenazine biosynthesis isomerase -
  ACFVP7_RS04630 (ACFVP7_04630) - 912291..912875 (+) 585 WP_396583032.1 nitroreductase -
  ACFVP7_RS04635 (ACFVP7_04635) - 912914..913105 (-) 192 WP_003233561.1 YfhD family protein -
  ACFVP7_RS04640 (ACFVP7_04640) - 913172..913282 (-) 111 WP_003223230.1 YfhE family protein -
  ACFVP7_RS04645 (ACFVP7_04645) - 913337..914248 (-) 912 WP_396583033.1 TIGR01777 family oxidoreductase -
  ACFVP7_RS04650 (ACFVP7_04650) recX 914337..915128 (+) 792 WP_072176012.1 recombination regulator RecX Regulator
  ACFVP7_RS04655 (ACFVP7_04655) - 915137..915451 (+) 315 WP_003244592.1 YfhH family protein -
  ACFVP7_RS04660 (ACFVP7_04660) - 915595..916788 (+) 1194 WP_396583034.1 MFS transporter -
  ACFVP7_RS04665 (ACFVP7_04665) - 916820..916972 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ACFVP7_RS04670 (ACFVP7_04670) - 917097..917366 (+) 270 WP_003243789.1 YfhJ family protein -
  ACFVP7_RS04675 (ACFVP7_04675) - 917511..918029 (+) 519 WP_024573181.1 SH3 domain-containing protein -
  ACFVP7_RS04680 (ACFVP7_04680) spdL 918114..918446 (+) 333 WP_024573182.1 SdpC immunity protein SpdL -
  ACFVP7_RS04685 (ACFVP7_04685) ephM 918433..919293 (+) 861 WP_396583035.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30884.07 Da        Isoelectric Point: 6.6687

>NTDB_id=1068276 ACFVP7_RS04650 WP_072176012.1 914337..915128(+) (recX) [Bacillus sp. SG20033]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=1068276 ACFVP7_RS04650 WP_072176012.1 914337..915128(+) (recX) [Bacillus sp. SG20033]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGGGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTACGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCAGGAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.62

100

0.996

Multiple sequence alignment