Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   ACFMPA_RS14345 Genome accession   NZ_CP172605
Coordinates   2760279..2761031 (-) Length   250 a.a.
NCBI ID   WP_134818920.1    Uniprot ID   -
Organism   Bacillus sp. SG20032     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2755279..2766031
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFMPA_RS14320 (ACFMPA_14320) mreC 2755692..2756564 (-) 873 WP_009967915.1 rod shape-determining protein MreC -
  ACFMPA_RS14325 (ACFMPA_14325) mreB 2756595..2757608 (-) 1014 WP_003229650.1 cell shape-determining protein MreB -
  ACFMPA_RS14330 (ACFMPA_14330) radC 2757700..2758395 (-) 696 WP_003246034.1 DNA repair protein RadC -
  ACFMPA_RS14335 (ACFMPA_14335) - 2758432..2759001 (-) 570 WP_004398496.1 Maf family nucleotide pyrophosphatase -
  ACFMPA_RS14340 (ACFMPA_14340) spoIIB 2759154..2760152 (-) 999 WP_076458219.1 stage II sporulation protein SpoIIB -
  ACFMPA_RS14345 (ACFMPA_14345) comC 2760279..2761031 (-) 753 WP_134818920.1 A24 family peptidase Machinery gene
  ACFMPA_RS14350 (ACFMPA_14350) - 2761171..2762463 (-) 1293 WP_326225450.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  ACFMPA_RS14355 (ACFMPA_14355) valS 2762523..2765165 (-) 2643 WP_004398606.1 valine--tRNA ligase -
  ACFMPA_RS14360 (ACFMPA_14360) - 2765613..2765804 (+) 192 WP_003222590.1 hypothetical protein -

Sequence

Protein


Download         Length: 250 a.a.        Molecular weight: 26685.27 Da        Isoelectric Point: 9.4398

>NTDB_id=1068241 ACFMPA_RS14345 WP_134818920.1 2760279..2761031(-) (comC) [Bacillus sp. SG20032]
MLSILFIFGLILGSFYYTAGCRIPLHLSIIAPRSSCPFCRRTLTPAELIPILSFLFQKGKCKSCGHRISFMYPAAELVTA
CLFAAAGIRFGTSLELFPAVVFISLLIIVAVTDIHFMLIPNRILIFFLPFLAAARLISPLDSWYAGLLGAAAGFLFLAVI
AAITHGGVGGGDIKLFAVIGFVLGVKMLAAAFFFSVLIGALYGATAVLTGRLAKRQPLPFAPAIAAGSILAYLYGDSIIS
FYIKMALADC

Nucleotide


Download         Length: 753 bp        

>NTDB_id=1068241 ACFMPA_RS14345 WP_134818920.1 2760279..2761031(-) (comC) [Bacillus sp. SG20032]
ATGCTATCCATTCTTTTTATCTTCGGACTTATCCTTGGTTCTTTTTACTATACGGCCGGGTGCCGTATCCCCTTACATCT
ATCTATTATTGCGCCCCGTTCATCATGCCCGTTTTGCCGGCGGACATTAACTCCTGCAGAATTAATTCCCATCCTGTCAT
TCCTATTTCAAAAAGGTAAATGTAAAAGCTGCGGGCATAGGATTTCTTTTATGTATCCCGCAGCAGAGCTTGTGACAGCG
TGTTTATTTGCTGCCGCAGGAATACGCTTTGGCACATCGCTGGAACTGTTTCCCGCTGTGGTGTTTATCTCTCTTCTCAT
TATTGTTGCAGTGACAGATATTCATTTTATGCTGATTCCAAATCGAATATTGATTTTCTTTCTTCCCTTTTTGGCGGCCG
CGAGATTGATTTCTCCACTTGATTCCTGGTATGCAGGCCTGCTAGGTGCGGCAGCCGGATTTCTATTTCTGGCTGTAATT
GCTGCAATCACCCATGGGGGAGTAGGGGGAGGAGATATTAAATTATTTGCGGTGATTGGCTTTGTGCTTGGTGTGAAAAT
GCTGGCAGCTGCCTTTTTCTTTTCAGTTTTGATAGGTGCATTATATGGAGCGACAGCTGTTCTAACTGGTAGGCTCGCTA
AAAGGCAGCCGCTTCCCTTCGCCCCCGCTATAGCCGCAGGGAGCATTTTAGCCTATTTATACGGTGACTCTATCATTTCT
TTTTATATCAAAATGGCATTGGCTGACTGCTGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(7-90)

Type IV leader peptidase family (Peptidase_A24)

(101-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

99.19

98.8

0.98

Multiple sequence alignment