Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACFMPA_RS07790 Genome accession   NZ_CP172605
Coordinates   1478140..1478715 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus sp. SG20032     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1473140..1483715
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFMPA_RS07760 (ACFMPA_07760) dapD 1473328..1474038 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ACFMPA_RS07765 (ACFMPA_07765) - 1474108..1475232 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  ACFMPA_RS07770 (ACFMPA_07770) - 1475294..1475539 (+) 246 WP_003232382.1 YkuS family protein -
  ACFMPA_RS07775 (ACFMPA_07775) mscT 1475576..1476379 (-) 804 WP_029317733.1 small-conductance mechanosensitive channel protein MscT -
  ACFMPA_RS07780 (ACFMPA_07780) ahpA 1476616..1477158 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  ACFMPA_RS07785 (ACFMPA_07785) ykuV 1477228..1477674 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  ACFMPA_RS07790 (ACFMPA_07790) rok 1478140..1478715 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  ACFMPA_RS07795 (ACFMPA_07795) cse15 1478756..1479721 (-) 966 WP_048654871.1 spore protein Cse15 -
  ACFMPA_RS07800 (ACFMPA_07800) - 1479858..1480457 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  ACFMPA_RS07805 (ACFMPA_07805) - 1480508..1481527 (+) 1020 WP_032721477.1 molybdopterin-synthase adenylyltransferase MoeB -
  ACFMPA_RS07810 (ACFMPA_07810) glp 1481545..1482837 (+) 1293 WP_069322564.1 gephyrin-like molybdotransferase Glp -
  ACFMPA_RS07815 (ACFMPA_07815) mobB 1482798..1483319 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=1068215 ACFMPA_RS07790 WP_003232378.1 1478140..1478715(+) (rok) [Bacillus sp. SG20032]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=1068215 ACFMPA_RS07790 WP_003232378.1 1478140..1478715(+) (rok) [Bacillus sp. SG20032]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment