Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACFMPA_RS04600 Genome accession   NZ_CP172605
Coordinates   903207..904001 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus sp. SG20032     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 898207..909001
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFMPA_RS04570 (ACFMPA_04570) - 899046..900077 (+) 1032 WP_003243057.1 iron chelate uptake ABC transporter family permease subunit -
  ACFMPA_RS04575 (ACFMPA_04575) - 900192..901073 (+) 882 WP_396464621.1 PhzF family phenazine biosynthesis isomerase -
  ACFMPA_RS04580 (ACFMPA_04580) - 901161..901745 (+) 585 WP_003243940.1 nitroreductase -
  ACFMPA_RS04585 (ACFMPA_04585) - 901784..901975 (-) 192 WP_003233561.1 YfhD family protein -
  ACFMPA_RS04590 (ACFMPA_04590) - 902042..902152 (-) 111 WP_003223230.1 YfhE family protein -
  ACFMPA_RS04595 (ACFMPA_04595) - 902207..903118 (-) 912 WP_029726845.1 TIGR01777 family oxidoreductase -
  ACFMPA_RS04600 (ACFMPA_04600) recX 903207..904001 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  ACFMPA_RS04605 (ACFMPA_04605) - 904003..904317 (+) 315 WP_024573179.1 YfhH family protein -
  ACFMPA_RS04610 (ACFMPA_04610) - 904460..905653 (+) 1194 WP_283857613.1 MFS transporter -
  ACFMPA_RS04615 (ACFMPA_04615) - 905685..905837 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ACFMPA_RS04620 (ACFMPA_04620) - 905962..906231 (+) 270 WP_003243789.1 YfhJ family protein -
  ACFMPA_RS04625 (ACFMPA_04625) - 906376..906894 (+) 519 WP_088325476.1 SH3 domain-containing protein -
  ACFMPA_RS04630 (ACFMPA_04630) spdL 906979..907311 (+) 333 WP_024573182.1 SdpC immunity protein SpdL -
  ACFMPA_RS04635 (ACFMPA_04635) ephM 907298..908158 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=1068197 ACFMPA_RS04600 WP_029726844.1 903207..904001(+) (recX) [Bacillus sp. SG20032]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1068197 ACFMPA_RS04600 WP_029726844.1 903207..904001(+) (recX) [Bacillus sp. SG20032]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAAATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment