Detailed information NTG1068119

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: RSP673_RS03665
• Genome accession: NZ_CP172582
• Coordinates: 787306..788439 (-)
• Length: 377 a.a.
• NCBI ID: WP_014618044.1
• Uniprot ID: F6G4B5
• Organism: Ralstonia solanacearum P673
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 782306..793439

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RSP673_RS03640 (RSP673_003640)	ntrB	782470..783321 (-)	852	WP_039551000.1	nitrate ABC transporter permease	-
RSP673_RS03645 (RSP673_003645)	-	783427..784689 (-)	1263	WP_014618048.1	CmpA/NrtA family ABC transporter substrate-binding protein	-
RSP673_RS03650 (RSP673_003650)	-	784968..785594 (-)	627	WP_014618047.1	ANTAR domain-containing response regulator	-
RSP673_RS03655 (RSP673_003655)	-	785745..786446 (+)	702	WP_014618046.1	fumarylacetoacetate hydrolase family protein	-
RSP673_RS03660 (RSP673_003660)	maiA	786450..787100 (+)	651	WP_039550996.1	maleylacetoacetate isomerase	-
RSP673_RS03665 (RSP673_003665)	pilA	787306..788439 (-)	1134	WP_014618044.1	signal recognition particle-docking protein FtsY	Machinery gene
RSP673_RS03670 (RSP673_003670)	-	788500..789993 (+)	1494	WP_039550994.1	pitrilysin family protein	-
RSP673_RS03675 (RSP673_003675)	-	789993..791336 (+)	1344	WP_039550991.1	pitrilysin family protein	-
RSP673_RS03680 (RSP673_003680)	rsmD	791414..792070 (+)	657	WP_039550989.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
RSP673_RS03685 (RSP673_003685)	coaD	792266..792772 (+)	507	WP_003262550.1	pantetheine-phosphate adenylyltransferase	-
RSP673_RS03690 (RSP673_003690)	-	792823..793071 (+)	249	WP_003262548.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 40168.48 Da
• Isoelectric Point: 5.8101

>NTDB_id=1068119 RSP673_RS03665 WP_014618044.1 787306..788439(-) (pilA) [Ralstonia solanacearum P673]
MFSFWKKRKAEPQPAAEPAPPAAAPEAVQAPVPAPVASPTPAPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVMEQAR
KGWMSRLRSGLSKTSKNLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAESVKTALRDLLV
ELLHPLEKTMVLGRDQPMVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQES
GDPAAVIFDAVNAARARGIDIVMADTAGRLPTQMHLMEELKKVRRVIGKAMVTAPHETLLVIDANTGQNALAQVKAFDDA
LGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1134 bp

>NTDB_id=1068119 RSP673_RS03665 WP_014618044.1 787306..788439(-) (pilA) [Ralstonia solanacearum P673]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCCGCCGAACCCGCGCCGCCCGCCGCCGCGCCCGAAGC
CGTCCAGGCCCCGGTACCGGCCCCGGTTGCCTCCCCCACCCCTGCCCCTGCACCCGCCCCGGTTGCCGTGCCGGATACGC
CGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGACGACATCGAGACCGTACCGACGCCGCCCGTGATGGAGCAGGCGCGC
AAGGGCTGGATGTCTCGCCTGCGCTCGGGGCTGTCGAAGACCAGCAAGAACCTGACCACGCTGTTCGTCGGCGTGAAGGT
GGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTGGATGCCACCGAATACCTGCTGG
ACGAGCTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGAGCGTGAAGACCGCGCTGCGCGACCTGCTCGTC
GAGCTGCTGCACCCGCTGGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGATGGTGATCATGATCGCGGGCGTCAACGG
TGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTACGGGCAGTCCGTGCTGCTGGCCGCCGGCG
ACACGTTCCGCGCCGCCGCCCGCGAGCAACTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAGGAGTCG
GGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGTGCCCGCGGCATCGACATTGTCATGGCCGACACCGC
CGGCCGCCTGCCGACCCAGATGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAGGCCATGGTGACGG
CGCCGCACGAAACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAGGCTTTCGACGATGCA
CTCGGCCTGACCGGCCTGATCGTCACTAAGCTGGACGGCACCGCCAAAGGTGGCATCCTGGCCGCCATCGCGCGGCAGCG
GCCGGTGCCGGTGTATTTCATCGGCGTGGGCGAACAGGTCGAAGACCTGCAACCGTTCTCCGCGCGCGAATTCGCCGACG
CGCTGCTGGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (177-377)

• SRP54-type protein, helical bundle domain (SRP54_N) (96-157)

3D structure

• AlphaFold DB: F6G4B5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.202	100	0.565