Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   ACG2XO_RS04085 Genome accession   NZ_CP172558
Coordinates   864126..864509 (-) Length   127 a.a.
NCBI ID   WP_410499542.1    Uniprot ID   -
Organism   Chitinibacter sp. S2-10     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 859126..869509
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACG2XO_RS04070 (ACG2XO_04070) - 860982..863162 (-) 2181 WP_410499539.1 methyl-accepting chemotaxis protein -
  ACG2XO_RS04075 (ACG2XO_04075) - 863199..863714 (-) 516 WP_410499540.1 chemotaxis protein CheW -
  ACG2XO_RS04080 (ACG2XO_04080) - 863732..864094 (-) 363 WP_410499541.1 response regulator -
  ACG2XO_RS04085 (ACG2XO_04085) pilG 864126..864509 (-) 384 WP_410499542.1 twitching motility response regulator PilG Regulator
  ACG2XO_RS04090 (ACG2XO_04090) yihA 864818..865447 (-) 630 WP_410499543.1 ribosome biogenesis GTP-binding protein YihA/YsxC -
  ACG2XO_RS04095 (ACG2XO_04095) - 865582..866196 (+) 615 WP_410499544.1 c-type cytochrome -
  ACG2XO_RS04100 (ACG2XO_04100) - 866285..868321 (+) 2037 WP_410499545.1 cytochrome c biogenesis protein ResB -
  ACG2XO_RS04105 (ACG2XO_04105) ccsB 868325..869470 (+) 1146 WP_410499546.1 c-type cytochrome biogenesis protein CcsB -

Sequence


Protein


Download         Length: 127 a.a.        Molecular weight: 13927.20 Da        Isoelectric Point: 7.7473

>NTDB_id=1068027 ACG2XO_RS04085 WP_410499542.1 864126..864509(-) (pilG) [Chitinibacter sp. S2-10]
MSNLTGVKVMVIDDSNTIRRSAEIFLGQAGCEVILAEDGFDALAKIADYHPNVIFVDVMMPRLDGYQTCALIKKNPRFKA
TPVVMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLLAAVRSHACAV

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1068027 ACG2XO_RS04085 WP_410499542.1 864126..864509(-) (pilG) [Chitinibacter sp. S2-10]
ATGTCCAATTTGACAGGTGTTAAGGTGATGGTGATTGACGACAGCAATACCATTCGCCGTAGTGCCGAGATATTTTTGGG
GCAAGCTGGGTGTGAGGTAATTCTGGCCGAAGACGGCTTTGACGCATTGGCCAAAATTGCTGATTATCATCCGAATGTGA
TTTTCGTCGATGTGATGATGCCGCGCTTGGATGGGTATCAGACGTGCGCCCTGATCAAAAAAAACCCGCGCTTTAAAGCG
ACGCCGGTGGTGATGTTATCATCGAAGGATGGACTGTTTGACAGAGCCCGGGGCAGGATGGTCGGCTCTGATGAGTATTT
GACCAAACCATTCACCAAAGACAGTTTACTTGCCGCAGTGCGTTCACACGCGTGCGCTGTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

65.854

96.85

0.638


Multiple sequence alignment