Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACH58L_RS10855 Genome accession   NZ_CP172443
Coordinates   2297727..2298323 (+) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain KPN0423     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2292727..2303323
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH58L_RS10835 (ACH58L_10835) - 2292919..2294676 (-) 1758 WP_048254375.1 Lon protease family protein -
  ACH58L_RS10840 (ACH58L_10840) matP 2294862..2295314 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACH58L_RS10845 (ACH58L_10845) ompA 2295446..2296516 (-) 1071 WP_002898408.1 porin OmpA -
  ACH58L_RS10850 (ACH58L_10850) sulA 2296869..2297378 (-) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  ACH58L_RS10855 (ACH58L_10855) sxy/tfoX 2297727..2298323 (+) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  ACH58L_RS10860 (ACH58L_10860) yccS 2298337..2300472 (-) 2136 WP_002898422.1 YccS family putative transporter -
  ACH58L_RS10865 (ACH58L_10865) - 2300490..2300936 (-) 447 WP_002898425.1 YccF domain-containing protein -
  ACH58L_RS10870 (ACH58L_10870) helD 2301061..2303115 (+) 2055 WP_004179218.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=1067841 ACH58L_RS10855 WP_004150836.1 2297727..2298323(+) (sxy/tfoX) [Klebsiella pneumoniae strain KPN0423]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1067841 ACH58L_RS10855 WP_004150836.1 2297727..2298323(+) (sxy/tfoX) [Klebsiella pneumoniae strain KPN0423]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTATCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment