Detailed information NTG1067702

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACH9GZ_RS04595
• Genome accession: NZ_CP172429
• Coordinates: 927599..928702 (-)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain CIDM-MRBP01
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 922599..933702

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH9GZ_RS04570 (ACH9GZ_04570)	-	922638..923587 (+)	950	Protein_900	IS481-like element IS481 family transposase	-
ACH9GZ_RS04575 (ACH9GZ_04575)	-	923581..924066 (+)	486	Protein_901	phosphonate ABC transporter ATP-binding protein	-
ACH9GZ_RS04580 (ACH9GZ_04580)	phnE	924084..924953 (+)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
ACH9GZ_RS04585 (ACH9GZ_04585)	phnE	924950..925771 (+)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
ACH9GZ_RS04590 (ACH9GZ_04590)	-	925954..927552 (+)	1599	Protein_904	CYTH and CHAD domain-containing protein	-
ACH9GZ_RS04595 (ACH9GZ_04595)	pilA	927599..928702 (-)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
ACH9GZ_RS04600 (ACH9GZ_04600)	rsmD	928778..929398 (+)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACH9GZ_RS04605 (ACH9GZ_04605)	coaD	929419..929928 (+)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
ACH9GZ_RS04610 (ACH9GZ_04610)	-	929983..930234 (+)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ACH9GZ_RS04615 (ACH9GZ_04615)	-	930298..931431 (+)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
ACH9GZ_RS04620 (ACH9GZ_04620)	-	931439..931825 (-)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=1067702 ACH9GZ_RS04595 WP_023853086.1 927599..928702(-) (pilA) [Bordetella pertussis strain CIDM-MRBP01]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=1067702 ACH9GZ_RS04595 WP_023853086.1 927599..928702(-) (pilA) [Bordetella pertussis strain CIDM-MRBP01]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507