Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ACFSN5_RS09830 Genome accession   NZ_CP172427
Coordinates   2133595..2134314 (+) Length   239 a.a.
NCBI ID   WP_165212883.1    Uniprot ID   -
Organism   Streptococcus sp. ZJ 1593     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2128595..2139314
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFSN5_RS09820 (ACFSN5_09820) treC 2128723..2130351 (-) 1629 WP_165329503.1 alpha,alpha-phosphotrehalase -
  ACFSN5_RS09825 (ACFSN5_09825) treP 2131133..2133100 (-) 1968 WP_165329504.1 PTS system trehalose-specific EIIBC component -
  ACFSN5_RS09830 (ACFSN5_09830) treR 2133595..2134314 (+) 720 WP_165212883.1 trehalose operon repressor Regulator
  ACFSN5_RS09835 (ACFSN5_09835) - 2134735..2134941 (+) 207 WP_165212885.1 hypothetical protein -
  ACFSN5_RS09840 (ACFSN5_09840) - 2134934..2135503 (+) 570 WP_165212955.1 hypothetical protein -
  ACFSN5_RS09845 (ACFSN5_09845) - 2135506..2135718 (+) 213 WP_165212887.1 helix-turn-helix transcriptional regulator -
  ACFSN5_RS09850 (ACFSN5_09850) - 2136013..2138649 (-) 2637 WP_165212957.1 FtsX-like permease family protein -

Sequence

Protein


Download         Length: 239 a.a.        Molecular weight: 27797.88 Da        Isoelectric Point: 9.1550

>NTDB_id=1067695 ACFSN5_RS09830 WP_165212883.1 2133595..2134314(+) (treR) [Streptococcus sp. ZJ 1593]
MKKYQEVFQDLESKIAEGLYPPETALPSENTLTKTYQVSRDTIRKALKLLEKAGLVQKSQGRQTLVLRHQHFNFPVSHLT
SYQELVNTLGMDSQTKVLALDRLIVDQKLQELTGFPASKQVWRIIRQRLVNGTASVVDIDYLLIDCVKQMTKEIAQRSIY
DYLENQLHLSIEGAKKEITIEQMTNQDKIWLDVGAEHHVVSVRSRVYLADGQQFQFTESRHLLEKFHFVDFARRKRQEP

Nucleotide


Download         Length: 720 bp        

>NTDB_id=1067695 ACFSN5_RS09830 WP_165212883.1 2133595..2134314(+) (treR) [Streptococcus sp. ZJ 1593]
ATGAAAAAATATCAAGAAGTTTTTCAAGATTTGGAGAGTAAAATTGCAGAAGGGCTCTATCCCCCTGAGACCGCATTGCC
TAGTGAAAATACCCTAACGAAGACCTATCAAGTCAGCCGCGATACGATCCGGAAAGCTTTAAAATTGCTAGAAAAGGCGG
GGCTGGTCCAAAAATCTCAAGGAAGACAGACGCTGGTGCTGCGCCATCAACACTTTAATTTTCCGGTGTCTCATTTAACC
AGTTACCAGGAGCTAGTCAATACTTTAGGAATGGACTCTCAGACTAAAGTTCTAGCCTTAGATCGACTGATTGTCGATCA
AAAATTACAGGAGCTCACAGGTTTTCCCGCCAGCAAACAGGTTTGGCGTATCATACGGCAACGCCTTGTCAATGGCACAG
CTTCGGTGGTTGATATTGACTACCTACTGATTGATTGCGTTAAGCAGATGACCAAGGAGATTGCCCAGCGCTCGATCTAT
GATTACTTGGAGAACCAACTACACCTTTCTATTGAGGGGGCTAAAAAAGAAATTACCATCGAGCAGATGACCAATCAGGA
TAAAATTTGGCTTGATGTGGGCGCCGAACACCATGTTGTATCTGTCAGATCCCGTGTTTATTTGGCTGACGGCCAGCAGT
TCCAATTTACGGAAAGCCGACATTTGCTTGAGAAGTTTCACTTCGTAGATTTTGCTAGGCGGAAAAGACAAGAGCCTTAG

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(89-226)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

57.203

98.745

0.565

Multiple sequence alignment