Detailed information NTG1067694

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: ACFSN5_RS09725
• Genome accession: NZ_CP172427
• Coordinates: 2108060..2110501 (-)
• Length: 813 a.a.
• NCBI ID: WP_165212125.1
• Uniprot ID: -
• Organism: Streptococcus sp. ZJ 1593
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 2103060..2115501

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFSN5_RS09700 (ACFSN5_09700)	-	2104045..2104233 (+)	189	Protein_1871	hypothetical protein	-
ACFSN5_RS09705 (ACFSN5_09705)	yajC	2104328..2104675 (-)	348	WP_165212131.1	preprotein translocase subunit YajC	-
ACFSN5_RS09710 (ACFSN5_09710)	hslO	2104861..2105733 (+)	873	WP_165212129.1	Hsp33 family molecular chaperone HslO	-
ACFSN5_RS09715 (ACFSN5_09715)	dusB	2105720..2106700 (+)	981	WP_165212127.1	tRNA dihydrouridine synthase DusB	-
ACFSN5_RS09720 (ACFSN5_09720)	-	2106738..2107637 (+)	900	WP_346773317.1	C4-dicarboxylate ABC transporter	-
ACFSN5_RS09725 (ACFSN5_09725)	clpC	2108060..2110501 (-)	2442	WP_165212125.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
ACFSN5_RS09730 (ACFSN5_09730)	-	2110494..2110961 (-)	468	WP_165212123.1	CtsR family transcriptional regulator	-

Sequence

Protein

• Length: 813 a.a.
• Molecular weight: 90714.28 Da
• Isoelectric Point: 6.1379

>NTDB_id=1067694 ACFSN5_RS09725 WP_165212125.1 2108060..2110501(-) (clpC) [Streptococcus sp. ZJ 1593]
MTDYSLKMQEIFSRAQYQATRFQSRFLETWHVFLAMVDTDETVAHLALMDFADQIDLDEYEDAAVLVIRRKPLKTVKVQE
LLPASRALERVLAYAGRIARAVKAPEIGSEHVLLSMMFGRDNLAARILEQVGFRFQDEGKDTLRLIDLRKVLERYAGFSK
EDVKAIFDLAKPKKSGNNNFSNMMGPQPTAGDLADFTRDLTALASQGQLDRVVGRDEEITRILQILSRKTKNNPVLVGDA
GVGKTALAYGLAQRIVEGEVPYELAEFRVLELDMMSVVAGTRFRGDFEERMNQIIADIEADGHIILFVDEVHTIMGSGSG
IDSTLDAANILKPALSRGTLHMIGATTQEEYSKHIEKDAALSRRFARVLIEEPSVDEAYQILLGLKGSYEVYHNVIISEQ
AILTTVKSAHRYLISKNLPDSAIDLLDETSAMVQNTVKRSLPTFLSSADQALLSGDLGAVADLLRAEDKQKIRKPVVVGE
EDILRTLSKLSGIPLEKMTQADNQRYLNLERELHKRVIGQEDAVSAVSRAIRRNQSGIRTGKRPIGSFMFLGPTGVGKTE
LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRQKPYSVLLFDEVEKAHPDIFNVLLQV
LDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKAISHDYEAMQSRIMEELKKTYRPEFINRIDEKIVFHS
LTPDHMRQVVKLMIKPLEVTLAEKNIVLKVQPSALKLLAEHGYDPEMGARPLRRTIQIEIEDKLSELLLSGQLKPGANLK
IGSHKGVLKFNLV

Nucleotide

• Length: 2442 bp

>NTDB_id=1067694 ACFSN5_RS09725 WP_165212125.1 2108060..2110501(-) (clpC) [Streptococcus sp. ZJ 1593]
ATGACTGATTATTCTCTTAAAATGCAAGAAATCTTTAGCCGAGCTCAGTATCAAGCCACTCGTTTTCAAAGTCGATTTTT
GGAAACTTGGCATGTTTTTTTGGCTATGGTCGATACTGATGAGACGGTGGCTCACCTGGCTTTGATGGATTTTGCTGATC
AAATTGATTTAGACGAGTATGAGGATGCAGCTGTCTTGGTGATCCGCCGCAAGCCCCTTAAAACTGTCAAGGTCCAAGAG
CTTTTACCAGCTTCAAGAGCCTTGGAGCGTGTTTTGGCTTATGCTGGTCGGATTGCTCGAGCGGTTAAGGCACCTGAAAT
TGGCAGTGAGCATGTTCTTTTATCTATGATGTTTGGCCGCGATAATCTAGCAGCGCGGATTTTAGAGCAGGTTGGCTTTC
GTTTTCAAGACGAAGGTAAAGATACACTGCGTCTGATTGATCTGCGTAAGGTCTTAGAGCGTTATGCTGGTTTTTCTAAG
GAAGATGTTAAAGCCATTTTTGACTTGGCTAAGCCTAAGAAATCTGGTAATAACAACTTTAGTAATATGATGGGTCCTCA
ACCCACTGCTGGTGATTTAGCTGATTTCACAAGAGATCTGACAGCTTTGGCCAGTCAAGGTCAATTGGATAGAGTTGTAG
GCCGTGATGAAGAAATTACTCGTATCTTACAAATTCTCAGCCGTAAAACTAAAAATAATCCTGTTTTAGTCGGTGATGCT
GGTGTTGGTAAAACAGCCTTGGCTTACGGTCTAGCGCAGAGAATTGTTGAGGGAGAGGTCCCTTATGAACTAGCTGAATT
CCGAGTTTTAGAATTGGATATGATGTCAGTTGTAGCGGGCACCCGTTTCCGAGGCGATTTCGAAGAGCGGATGAATCAGA
TTATTGCTGATATCGAAGCAGATGGTCATATTATCCTCTTTGTTGATGAAGTCCATACTATCATGGGATCTGGAAGCGGA
ATTGATAGCACTTTAGATGCTGCCAATATTCTCAAACCAGCACTTTCAAGGGGAACCCTCCACATGATTGGAGCAACGAC
TCAGGAGGAATATTCTAAGCACATTGAAAAAGATGCCGCCCTTTCGCGTCGTTTTGCCAGAGTTTTAATTGAAGAACCTT
CAGTTGATGAGGCCTATCAGATTCTTTTGGGACTTAAAGGAAGCTATGAGGTCTACCACAATGTTATCATCTCTGAACAA
GCTATTTTGACGACTGTAAAATCGGCCCATCGCTATTTAATCAGCAAGAATCTTCCGGATTCAGCTATTGATTTACTGGA
TGAGACCAGTGCCATGGTGCAAAATACGGTTAAACGTTCTCTGCCAACATTCCTAAGTTCAGCCGACCAAGCCCTCTTAT
CGGGAGATCTAGGAGCAGTTGCAGATCTACTTCGTGCGGAGGATAAGCAAAAGATTCGTAAACCTGTTGTTGTCGGAGAA
GAAGACATTCTGCGGACCCTTAGTAAGCTGTCTGGTATTCCGCTAGAGAAGATGACTCAGGCTGACAACCAGCGCTACCT
CAATCTAGAAAGGGAACTCCACAAACGGGTTATTGGTCAAGAGGATGCCGTATCTGCTGTGTCTAGAGCGATCCGCCGGA
ACCAATCGGGCATTCGAACAGGTAAGCGTCCAATCGGCTCTTTTATGTTCTTAGGGCCAACTGGGGTTGGTAAGACTGAG
TTGGCCAAGGCTCTAGCTGAGCTCCTCTTTGATGATGAGTCGGCTTTGATTCGCTTTGATATGTCTGAGTACATGGAAAA
ATTTGCTGCCAGTCGCCTCAACGGGGCTCCTCCGGGTTATGTTGGCTATGAAGAAGGTGGCGAGTTGACTGAAAAAGTTC
GGCAGAAACCCTACTCTGTTCTCCTTTTTGATGAGGTAGAAAAGGCCCATCCAGATATTTTTAATGTTCTCTTGCAAGTT
TTGGATGATGGGGTATTAACTGACAGCCGCGGCCGTAAGGTTGATTTTTCTAATACTATCATCATCATGACTAGCAATCT
GGGAGCAACTGCCTTGCGTGATGATAAGACTGTTGGGTTTGGGGCCAAAGCCATTAGTCATGACTATGAAGCTATGCAGA
GTCGGATTATGGAAGAACTCAAGAAAACCTACCGTCCGGAATTCATTAATCGAATTGATGAGAAGATTGTTTTCCATAGT
TTGACACCAGATCACATGCGTCAAGTTGTTAAGTTGATGATTAAGCCGCTGGAAGTTACTTTGGCTGAAAAAAATATCGT
TCTAAAGGTTCAGCCGTCTGCTCTCAAACTTTTGGCAGAGCATGGTTATGACCCTGAAATGGGAGCTCGTCCGCTACGTC
GGACCATCCAAATAGAAATTGAAGATAAGTTATCTGAATTGCTCTTGTCTGGCCAATTAAAACCAGGTGCAAACCTGAAA
ATTGGCAGCCATAAAGGAGTCTTGAAATTTAATCTGGTATGA

Domains

Predicted by InterproScan.

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-133)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (721-800)

• ATPase family associated with various cellular activities (AAA) (AAA) (235-368)

• AAA lid domain (AAA_lid_9) (374-438)

• AAA domain (Cdc48 subfamily) (AAA_2) (543-714)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Streptococcus mutans UA159	71.622	100	0.717
clpC	Streptococcus thermophilus LMD-9	70.012	100	0.704
clpC	Streptococcus thermophilus LMG 18311	70.012	100	0.704
clpC	Streptococcus pneumoniae Rx1	64.822	100	0.648
clpC	Streptococcus pneumoniae D39	64.822	100	0.648
clpC	Streptococcus pneumoniae TIGR4	64.699	100	0.647
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	49.095	100	0.501
clpC	Bacillus subtilis subsp. subtilis str. 168	44.121	100	0.448
clpE	Streptococcus mutans UA159	47.191	76.63	0.362