Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACFSN5_RS09055 Genome accession   NZ_CP172427
Coordinates   1963963..1964688 (-) Length   241 a.a.
NCBI ID   WP_165213222.1    Uniprot ID   -
Organism   Streptococcus sp. ZJ 1593     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1958963..1969688
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFSN5_RS09025 (ACFSN5_09025) nusA 1958980..1960212 (-) 1233 WP_398600680.1 transcription termination factor NusA -
  ACFSN5_RS09030 (ACFSN5_09030) rimP 1960377..1960853 (-) 477 WP_165213260.1 ribosome maturation factor RimP -
  ACFSN5_RS09040 (ACFSN5_09040) trmB 1961354..1961989 (-) 636 WP_165213228.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACFSN5_RS09045 (ACFSN5_09045) ccrZ 1961990..1962796 (-) 807 WP_398600683.1 cell cycle regulator CcrZ -
  ACFSN5_RS09050 (ACFSN5_09050) - 1962915..1963961 (-) 1047 WP_165213224.1 ABC transporter permease -
  ACFSN5_RS09055 (ACFSN5_09055) pptA 1963963..1964688 (-) 726 WP_165213222.1 ABC transporter ATP-binding protein Regulator
  ACFSN5_RS09060 (ACFSN5_09060) - 1964789..1965208 (+) 420 WP_165213220.1 HIT family protein -
  ACFSN5_RS09065 (ACFSN5_09065) - 1965205..1965507 (+) 303 WP_165213218.1 hypothetical protein -
  ACFSN5_RS09070 (ACFSN5_09070) brpA 1965856..1967079 (-) 1224 WP_398600687.1 biofilm formation/cell division transcriptional regulator BrpA -
  ACFSN5_RS09075 (ACFSN5_09075) - 1967088..1967600 (-) 513 WP_165213214.1 GNAT family N-acetyltransferase -
  ACFSN5_RS09080 (ACFSN5_09080) tsaE 1967593..1968033 (-) 441 WP_165213212.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACFSN5_RS09085 (ACFSN5_09085) - 1968134..1969552 (-) 1419 WP_165213202.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26953.51 Da        Isoelectric Point: 4.7146

>NTDB_id=1067689 ACFSN5_RS09055 WP_165213222.1 1963963..1964688(-) (pptA) [Streptococcus sp. ZJ 1593]
MLKIDKMTGGYRNIPVLKEISFEVPDGQLVGLIGLNGAGKSTTIKEIIGLLTPYQGIITIDDLSLAQDKEAYRKKIGFIP
ETPSLYEELTLKEHLETVAMAYDIPLDKALDRAQKLLKIFRLDDKLDWFPVNFSKGMKQKVMIICAFIVEPRLLIVDEPF
LGLDPVAINDLIDLLEEEKAKGASILMSTHVLDSAEKMCDSFIILHQGRIRAQGTLEDLRANFSQADASLNDIYMALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1067689 ACFSN5_RS09055 WP_165213222.1 1963963..1964688(-) (pptA) [Streptococcus sp. ZJ 1593]
ATGTTAAAAATAGACAAAATGACAGGGGGCTACCGCAATATCCCTGTCTTAAAAGAGATTTCTTTTGAGGTTCCTGATGG
TCAATTGGTCGGTCTTATTGGCCTTAATGGGGCCGGAAAATCAACGACTATCAAGGAAATTATCGGCCTTCTGACCCCTT
ATCAGGGAATTATTACTATTGATGACCTCAGCTTAGCTCAGGATAAGGAGGCCTATCGGAAAAAGATTGGCTTTATCCCT
GAAACGCCCAGCCTCTACGAAGAACTGACCCTAAAAGAGCACCTAGAAACGGTGGCTATGGCTTACGATATTCCACTTGA
TAAGGCATTGGATAGGGCTCAAAAGCTCCTCAAAATCTTTCGTTTGGATGATAAATTGGACTGGTTCCCAGTTAATTTTT
CTAAGGGAATGAAACAGAAAGTCATGATTATCTGTGCCTTTATCGTGGAGCCTAGGCTCTTGATTGTAGATGAGCCTTTC
TTAGGATTAGATCCGGTTGCCATCAATGATTTGATTGATCTTTTAGAGGAGGAAAAAGCTAAGGGTGCTTCCATCCTCAT
GTCCACGCACGTTTTGGATTCGGCTGAAAAGATGTGCGATAGCTTTATCATCCTCCACCAAGGAAGAATTAGGGCTCAGG
GGACTTTGGAGGATTTACGAGCTAACTTTAGTCAAGCAGATGCCAGCCTCAATGACATCTACATGGCTTTGACAAAAGAG
GTCTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.059

99.17

0.734
  pptA Streptococcus thermophilus LMD-9

73.64

99.17

0.73

Multiple sequence alignment