Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   ACFSN5_RS03020 Genome accession   NZ_CP172427
Coordinates   620635..621717 (+) Length   360 a.a.
NCBI ID   WP_165209788.1    Uniprot ID   -
Organism   Streptococcus sp. ZJ 1593     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 615635..626717
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFSN5_RS03000 (ACFSN5_03000) asnA 617287..618279 (+) 993 WP_165329165.1 aspartate--ammonia ligase -
  ACFSN5_RS03005 (ACFSN5_03005) - 618363..619442 (+) 1080 WP_165209391.1 MmcQ/YjbR family DNA-binding protein -
  ACFSN5_RS03010 (ACFSN5_03010) rsmD 619625..620164 (+) 540 WP_165209394.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ACFSN5_RS03015 (ACFSN5_03015) coaD 620154..620645 (+) 492 WP_165209397.1 pantetheine-phosphate adenylyltransferase -
  ACFSN5_RS03020 (ACFSN5_03020) sepM 620635..621717 (+) 1083 WP_165209788.1 SepM family pheromone-processing serine protease Regulator
  ACFSN5_RS03025 (ACFSN5_03025) - 621875..622438 (+) 564 WP_165209399.1 YutD-like domain-containing protein -
  ACFSN5_RS03030 (ACFSN5_03030) rlmN 622440..623555 (+) 1116 WP_165329164.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  ACFSN5_RS03035 (ACFSN5_03035) - 623562..624089 (+) 528 WP_165329163.1 VanZ family protein -
  ACFSN5_RS03040 (ACFSN5_03040) - 624257..626026 (+) 1770 WP_165329162.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 360 a.a.        Molecular weight: 39192.04 Da        Isoelectric Point: 10.0091

>NTDB_id=1067666 ACFSN5_RS03020 WP_165209788.1 620635..621717(+) (sepM) [Streptococcus sp. ZJ 1593]
MVNKAASQVSPQKGSFVKRFKWWLIGGFALLALAFCFIVPLPYYVEAPGGAFDINQVMTVNGKTNKDKGSYNFVAVEVRP
GTVVNLAYSWFNKDTTEIVSKEKITGGASTKDYELMNQYYMENSQNTAVYQALKLSGKKVNLDYKGVYVLNIADNSTFKG
ILDIADTVTGINGKSFKSSKELVKYVTGLKLGSKVTVQYTSQGKKESSKGKVVKLKNGKNGIGITLTDHTEVSSPEKVKF
STQGVGGPSAGLMFTLSIYDQLNKENLLKGRMVAGTGTIEPDGSVGDIGGVSQKVVSADKSGAEIFFVPDNPVTKADKKY
YPQGNNYQEAKMMAKKIDSKMKIVPVKTAQEAIDYLEKTK

Nucleotide


Download         Length: 1083 bp        

>NTDB_id=1067666 ACFSN5_RS03020 WP_165209788.1 620635..621717(+) (sepM) [Streptococcus sp. ZJ 1593]
ATGGTAAATAAGGCAGCAAGTCAGGTCAGTCCCCAAAAAGGGAGTTTTGTTAAACGCTTTAAATGGTGGCTGATTGGCGG
TTTTGCCCTCTTGGCTCTGGCCTTCTGTTTTATAGTTCCTCTCCCTTATTATGTTGAAGCTCCTGGTGGTGCCTTTGATA
TTAATCAGGTTATGACGGTTAATGGCAAGACTAATAAGGATAAAGGTTCTTACAATTTCGTAGCGGTCGAAGTTCGGCCG
GGGACAGTTGTTAATCTCGCTTATTCTTGGTTCAATAAAGACACAACCGAGATTGTTTCCAAGGAAAAGATAACCGGCGG
TGCTAGCACCAAAGACTATGAACTGATGAATCAGTACTATATGGAAAATTCCCAGAATACGGCTGTTTATCAGGCCCTCA
AGCTGTCTGGTAAAAAGGTTAATTTAGACTATAAAGGTGTCTATGTCCTTAATATCGCTGACAATTCAACCTTTAAAGGC
ATTCTCGATATTGCTGATACTGTGACAGGTATCAATGGCAAGAGCTTCAAATCTTCTAAGGAATTGGTCAAGTATGTCAC
TGGTCTTAAATTAGGGTCCAAAGTCACTGTCCAATATACCAGTCAAGGTAAGAAGGAGTCGTCCAAGGGTAAAGTGGTCA
AGCTAAAAAATGGTAAAAATGGTATCGGGATTACCCTGACCGATCATACCGAAGTTAGCTCGCCTGAAAAGGTTAAGTTC
TCCACCCAAGGGGTCGGCGGACCTAGTGCGGGTCTTATGTTTACCTTGTCCATCTATGATCAACTCAATAAGGAAAATCT
GCTTAAAGGACGGATGGTTGCTGGAACAGGCACTATCGAGCCAGATGGTTCAGTCGGTGACATCGGCGGTGTTTCACAAA
AGGTTGTTTCTGCTGATAAATCGGGTGCTGAGATTTTCTTTGTTCCCGATAACCCTGTGACTAAGGCGGATAAGAAATAC
TATCCTCAGGGAAATAACTATCAAGAGGCCAAAATGATGGCTAAGAAGATTGATAGCAAGATGAAAATTGTCCCTGTCAA
GACAGCTCAGGAGGCTATCGACTATCTAGAAAAAACCAAATAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(144-207)

Lon protease (S16) C-terminal proteolytic domain (Lon_C)

(246-312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

63.158

95

0.6

Multiple sequence alignment