Detailed information NTG1067658

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: ACFSN5_RS02215
• Genome accession: NZ_CP172427
• Coordinates: 454223..456325 (+)
• Length: 700 a.a.
• NCBI ID: WP_165209008.1
• Uniprot ID: -
• Organism: Streptococcus sp. ZJ 1593
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 449223..461325

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFSN5_RS02205 (ACFSN5_02205)	-	449639..450352 (+)	714	WP_165329225.1	MerR family transcriptional regulator	-
ACFSN5_RS02210 (ACFSN5_02210)	-	450824..453772 (-)	2949	WP_165329244.1	KxYKxGKxW signal peptide domain-containing protein	-
ACFSN5_RS02215 (ACFSN5_02215)	clpC	454223..456325 (+)	2103	WP_165209008.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
ACFSN5_RS02220 (ACFSN5_02220)	-	456453..457283 (+)	831	WP_165329224.1	SDR family oxidoreductase	-
ACFSN5_RS02225 (ACFSN5_02225)	-	457352..458128 (-)	777	WP_165329223.1	glycyl-radical enzyme activating protein	-
ACFSN5_RS02230 (ACFSN5_02230)	-	458258..459004 (+)	747	WP_165329222.1	DeoR/GlpR family DNA-binding transcription regulator	-
ACFSN5_RS02235 (ACFSN5_02235)	-	459031..459270 (+)	240	Protein_399	helix-turn-helix domain-containing protein	-
ACFSN5_RS02240 (ACFSN5_02240)	-	459325..459624 (+)	300	Protein_400	PTS sugar transporter subunit IIC	-

Sequence

Protein

• Length: 700 a.a.
• Molecular weight: 76879.78 Da
• Isoelectric Point: 4.9001

>NTDB_id=1067658 ACFSN5_RS02215 WP_165209008.1 454223..456325(+) (clpC) [Streptococcus sp. ZJ 1593]
MNNNFGFNNMDDIFNQLMGNMGGFNSETRRYRINGREVTPEEFNYYRQTGHLPNQEAVQEESAQAGKGQLKQDGILAKLG
RNLTEEARQGKLDPVIGRNQEIQDTAEILARRTKNNPVLVGDAGVGKTAVVEGLAQAIVAGDVPASIKNKEIISIDISGL
EAGTQYRGAFEENIQKLIDEVKTAGNIILFFDEIHQILGAGSTGDGQGSKGLADIIKPALSRGELTVIGATTQDEYRNTI
LKNAALARRFNEVKVNAPSAEDTFAILRGIRPLYEQHHNVELPDKVLKAAVDYSIQYMPQRALPDKAIDLIDVTAAHLAA
QHPATDVKTLEADIAKARDRQQAAADKEDYEAALAEKVKIDELQKQIDNHTENQKVVATINDVAQAVERMTGIPVSQMGA
SDIERLKEMGSRLKGKVIGQDEAVQAVSKAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGTKDAVIRLD
MSEYSDRTAVSKLIGTTAGYVGYDDNANTLTERVRRNPYSIILLDEIEKADPQVITLLLQVLDDGRLTDGQGNTVNFKNT
VIIATSNAGYSFGAASEEDGKELSLRDKLAPFFRPEFLNRFNGVIEFSHLSKEDLKEIVDLMLDEVNHTLAKKNITLEVS
EAAKAYLIEEGYDEAMGARPLRRVIEGQIRDKVTDFYLDHLDVKALKADMVDGQLVISKA

Nucleotide

• Length: 2103 bp

>NTDB_id=1067658 ACFSN5_RS02215 WP_165209008.1 454223..456325(+) (clpC) [Streptococcus sp. ZJ 1593]
ATGAACAACAATTTTGGATTTAATAATATGGATGATATTTTCAATCAACTGATGGGGAATATGGGTGGTTTCAATTCGGA
AACTCGCCGATATCGTATCAATGGCCGGGAAGTCACTCCTGAAGAATTTAACTATTACCGTCAAACCGGTCACCTGCCTA
ATCAAGAAGCGGTGCAAGAAGAATCTGCTCAAGCTGGCAAAGGTCAGCTCAAACAGGATGGTATTTTGGCTAAATTGGGC
CGTAACTTGACTGAGGAAGCTCGTCAGGGTAAGCTGGATCCTGTAATCGGGCGGAATCAAGAAATTCAGGATACGGCTGA
AATCTTGGCTCGCCGGACTAAGAATAATCCCGTTTTGGTGGGGGATGCCGGTGTTGGTAAGACTGCGGTTGTCGAAGGCT
TGGCTCAAGCCATTGTCGCTGGGGATGTTCCAGCGTCAATCAAGAATAAGGAAATCATCTCTATCGATATTTCTGGTTTG
GAAGCTGGTACCCAATATCGGGGGGCCTTTGAAGAAAATATCCAAAAACTGATAGATGAGGTCAAGACTGCTGGAAATAT
TATTCTCTTCTTTGATGAAATTCATCAAATCCTCGGAGCTGGTAGTACTGGTGACGGTCAAGGTTCAAAGGGTTTGGCCG
ACATTATCAAACCCGCCCTCTCTCGTGGCGAGCTGACGGTTATTGGGGCAACAACCCAAGATGAATACCGCAACACCATT
TTGAAGAATGCGGCTTTGGCTCGCCGTTTCAATGAGGTCAAGGTTAATGCTCCTTCGGCAGAAGACACTTTTGCTATTTT
GAGAGGCATTAGACCTCTCTATGAACAACACCATAATGTGGAATTACCAGATAAGGTCTTGAAGGCTGCGGTAGATTACT
CTATTCAATATATGCCACAAAGGGCCCTGCCTGATAAGGCTATTGATTTGATTGATGTCACTGCAGCTCACTTGGCAGCT
CAACATCCAGCGACCGATGTTAAAACCCTAGAAGCTGATATAGCTAAGGCGCGTGATCGTCAGCAAGCCGCGGCTGATAA
GGAAGATTATGAAGCAGCTTTGGCTGAAAAGGTTAAGATCGATGAGTTGCAAAAACAAATCGATAACCACACTGAAAATC
AAAAGGTTGTGGCGACTATTAATGATGTTGCTCAAGCTGTTGAGCGTATGACCGGTATTCCTGTTTCGCAAATGGGTGCT
TCTGATATTGAACGCCTGAAAGAAATGGGCAGCCGCCTTAAAGGTAAAGTCATCGGCCAAGATGAAGCTGTACAGGCTGT
TAGTAAGGCCATTCGCCGAAACCGTGCGGGCTTTGACGAAGGAAATCGTCCAATCGGTAGCTTCCTTTTTGTCGGACCTA
CTGGTGTCGGTAAGACTGAGTTGGCTAAGCAATTGGCTTTGGATATGTTTGGCACCAAGGATGCGGTTATCCGTCTGGAT
ATGTCAGAGTACAGCGATCGAACAGCCGTTTCTAAGCTGATTGGGACAACTGCCGGCTATGTAGGCTACGATGATAACGC
CAATACCTTGACCGAACGGGTCCGCCGCAATCCTTACTCCATTATCCTCCTAGATGAAATCGAAAAGGCTGATCCACAAG
TTATTACTCTGCTCTTGCAAGTATTGGATGATGGCCGTCTGACTGACGGTCAAGGTAACACCGTCAACTTCAAGAATACT
GTGATTATCGCAACCTCTAATGCTGGTTATAGCTTTGGGGCTGCCTCAGAAGAGGATGGTAAAGAACTCAGTCTGCGCGA
TAAATTGGCCCCATTCTTCCGTCCAGAATTTCTCAACCGTTTCAACGGTGTCATTGAGTTCTCTCACCTCTCGAAAGAAG
ATTTGAAAGAAATCGTTGATCTTATGCTGGATGAAGTTAACCACACTCTGGCTAAAAAGAATATCACATTGGAAGTGAGC
GAAGCAGCCAAGGCCTACCTGATTGAGGAAGGTTACGATGAAGCCATGGGGGCTCGGCCTCTGCGTCGGGTTATTGAAGG
CCAAATTCGTGATAAGGTAACAGATTTCTACCTTGATCATCTTGATGTTAAAGCACTTAAGGCCGATATGGTAGACGGAC
AGTTGGTCATTTCTAAAGCCTAG

Domains

Predicted by InterproScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (118-250)

• AAA domain (Cdc48 subfamily) (AAA_2) (443-602)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (610-680)

• AAA lid domain (AAA_lid_9) (259-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Lactococcus lactis subsp. cremoris KW2	49.929	100	0.506
clpE	Streptococcus mutans UA159	51.956	91.286	0.474
clpE	Streptococcus pneumoniae TIGR4	47.226	100	0.474
clpE	Streptococcus pneumoniae Rx1	47.278	99.714	0.471
clpE	Streptococcus pneumoniae D39	47.278	99.714	0.471
clpE	Streptococcus pneumoniae R6	47.278	99.714	0.471
clpC	Bacillus subtilis subsp. subtilis str. 168	45.383	91.286	0.414
clpC	Streptococcus thermophilus LMD-9	43.499	89	0.387
clpC	Streptococcus pneumoniae Rx1	42.52	90.714	0.386
clpC	Streptococcus pneumoniae D39	42.52	90.714	0.386
clpC	Streptococcus thermophilus LMG 18311	43.339	89	0.386
clpC	Streptococcus mutans UA159	43.339	89	0.386
clpC	Streptococcus pneumoniae TIGR4	42.563	90.286	0.384
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	42.003	88.429	0.371