Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACHGMI_RS09285 Genome accession   NZ_CP172417
Coordinates   1697182..1697646 (+) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain AKPS2     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1692182..1702646
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHGMI_RS09265 fadH 1693382..1694146 (-) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -
  ACHGMI_RS09270 ppeE 1694277..1695137 (+) 861 WP_041344855.1 metallophosphoesterase -
  ACHGMI_RS09275 ltdD 1695194..1695688 (+) 495 WP_080326354.1 L,D-transpeptidase family protein -
  ACHGMI_RS09280 ykuC 1695764..1697056 (+) 1293 WP_014479656.1 MFS transporter -
  ACHGMI_RS09285 kre 1697182..1697646 (+) 465 WP_003232406.1 YkyB family protein Regulator
  ACHGMI_RS09290 cheV 1697690..1698601 (-) 912 WP_014476655.1 chemotaxis protein CheV -
  ACHGMI_RS09295 - 1698805..1698966 (+) 162 WP_003245246.1 hypothetical protein -
  ACHGMI_RS09300 dapX 1699168..1700349 (+) 1182 WP_041344851.1 aminotransferase A -
  ACHGMI_RS09305 kinA 1700359..1702179 (-) 1821 WP_041344849.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=1067577 ACHGMI_RS09285 WP_003232406.1 1697182..1697646(+) (kre) [Bacillus subtilis strain AKPS2]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1067577 ACHGMI_RS09285 WP_003232406.1 1697182..1697646(+) (kre) [Bacillus subtilis strain AKPS2]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment