Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   ACHGMI_RS07585 Genome accession   NZ_CP172417
Coordinates   1406388..1407509 (-) Length   373 a.a.
NCBI ID   WP_250540544.1    Uniprot ID   -
Organism   Bacillus subtilis strain AKPS2     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1401388..1412509
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHGMI_RS07560 cwlQ 1401527..1402261 (+) 735 WP_041336639.1 bifunctional muramidase/murein lytic transglycosylase -
  ACHGMI_RS07565 bhbI 1402516..1402914 (+) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  ACHGMI_RS07570 spxH 1402911..1403810 (+) 900 WP_041340381.1 protease adaptor protein SpxH -
  ACHGMI_RS07575 - 1404125..1404292 (+) 168 WP_003244944.1 hypothetical protein -
  ACHGMI_RS07580 pepF 1404329..1406158 (-) 1830 WP_186437512.1 oligoendopeptidase F -
  ACHGMI_RS07585 coiA 1406388..1407509 (-) 1122 WP_250540544.1 competence protein CoiA Machinery gene
  ACHGMI_RS07590 - 1407583..1407705 (+) 123 WP_128473814.1 hypothetical protein -
  ACHGMI_RS07595 mecA 1407700..1408356 (-) 657 WP_014479448.1 adaptor protein MecA Regulator
  ACHGMI_RS07600 - 1408323..1408463 (-) 141 WP_119122854.1 hypothetical protein -
  ACHGMI_RS07605 yjbE 1408633..1409289 (+) 657 WP_014479447.1 TerC family protein -
  ACHGMI_RS07610 spx 1409531..1409926 (-) 396 WP_014476435.1 transcriptional regulator Spx -
  ACHGMI_RS07615 yjbC 1410107..1410685 (-) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  ACHGMI_RS07620 yjbB 1410849..1412067 (-) 1219 Protein_1439 MFS transporter -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43731.78 Da        Isoelectric Point: 9.9955

>NTDB_id=1067567 ACHGMI_RS07585 WP_250540544.1 1406388..1407509(-) (coiA) [Bacillus subtilis strain AKPS2]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHLFRHKPHRFNSKETNRL
RLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIHFSAVLQQCKLHIHKKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFVE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=1067567 ACHGMI_RS07585 WP_250540544.1 1406388..1407509(-) (coiA) [Bacillus subtilis strain AKPS2]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTTGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCTCCATAGACATCGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGTTGTATGTATGGCTGAAAACACAACGGGCTTCTCCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCTTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAGACAAATCGCCTT
AGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAAGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGATAAACGTGCGCCAA
TTCATTTCTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAAAAAGAACATTGCACTCAGGTTCGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGCGGCATACATTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTGTAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

97.855

100

0.979


Multiple sequence alignment