Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACHGMI_RS02625 Genome accession   NZ_CP172417
Coordinates   508567..509517 (-) Length   316 a.a.
NCBI ID   WP_017696153.1    Uniprot ID   -
Organism   Bacillus subtilis strain AKPS2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 503567..514517
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHGMI_RS02605 cdaE 504436..505854 (+) 1419 WP_017696155.1 MDR family MFS transporter -
  ACHGMI_RS02610 yclQ 505900..506853 (-) 954 WP_017696154.1 petrobactin ABC transporter substrate-binding protein YclQ -
  ACHGMI_RS02615 yclP 506875..507633 (-) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  ACHGMI_RS02620 yclO 507627..508574 (-) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  ACHGMI_RS02625 ceuB 508567..509517 (-) 951 WP_017696153.1 petrobactin ABC transporter permease YclN Machinery gene
  ACHGMI_RS02630 thrD 509902..511266 (+) 1365 WP_017696152.1 aspartate kinase -
  ACHGMI_RS02635 yczN 511420..511533 (+) 114 WP_003234495.1 YjcZ family sporulation protein -
  ACHGMI_RS02640 yczM 511615..511704 (+) 90 WP_015482794.1 YjcZ family sporulation protein -
  ACHGMI_RS02645 phrC 511804..511926 (-) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  ACHGMI_RS02650 rapC 511910..513058 (-) 1149 WP_017696151.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34856.26 Da        Isoelectric Point: 9.8375

>NTDB_id=1067554 ACHGMI_RS02625 WP_017696153.1 508567..509517(-) (ceuB) [Bacillus subtilis strain AKPS2]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIIMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1067554 ACHGMI_RS02625 WP_017696153.1 508567..509517(-) (ceuB) [Bacillus subtilis strain AKPS2]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCATAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment