Detailed information NTG1067503

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: NSU12_RS12060
• Genome accession: NZ_CP172407
• Coordinates: 2454258..2456618 (-)
• Length: 786 a.a.
• NCBI ID: WP_343126746.1
• Uniprot ID: -
• Organism: Caldifermentibacillus hisashii strain FSL W8-0985
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2449258..2461618

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSU12_RS12040 (NSU12_12040)	-	2450137..2450313 (-)	177	WP_034771312.1	hypothetical protein	-
NSU12_RS12045 (NSU12_12045)	dtd	2450612..2451064 (-)	453	WP_326973271.1	D-aminoacyl-tRNA deacylase	-
NSU12_RS12050 (NSU12_12050)	-	2451078..2453270 (-)	2193	WP_251246284.1	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	-
NSU12_RS12055 (NSU12_12055)	-	2453755..2454267 (-)	513	WP_041846212.1	adenine phosphoribosyltransferase	-
NSU12_RS12060 (NSU12_12060)	recJ	2454258..2456618 (-)	2361	WP_343126746.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
NSU12_RS12065 (NSU12_12065)	secDF	2456728..2458989 (-)	2262	WP_343126747.1	protein translocase subunit SecDF	-
NSU12_RS12070 (NSU12_12070)	-	2459116..2459415 (-)	300	WP_251241224.1	post-transcriptional regulator	-
NSU12_RS12075 (NSU12_12075)	spoVB	2459548..2461098 (+)	1551	WP_343126748.1	stage V sporulation protein B	-

Sequence

Protein

• Length: 786 a.a.
• Molecular weight: 88912.41 Da
• Isoelectric Point: 6.0250

>NTDB_id=1067503 NSU12_RS12060 WP_343126746.1 2454258..2456618(-) (recJ) [Caldifermentibacillus hisashii strain FSL W8-0985]
MLQAKTRWAVREGNRQKAEQLMNELQLTPLVANLLVNRGLDTAESVKKFLNPDEEFHHPFLLNDMDICVERIFRAIRNGE
RMVVYGDYDADGVTSTYVLLKTLRELGADADFYIPNRFTEGYGPNEKAFRTLKEAGYHLIITVDNGIAGIHEAKVAKEIG
IDLIITDHHEPGPVLPDCLAIIHPKRADSNYPFKDLAGVGVAFKLVAALLGKVPEELLPFAAIGTIADLVPLKDENRLIV
KKALPLLQSSDHFGLKALMRVAGINQQELNEESISFGLAPRINAPGRLYHAGMVVDLFLANDKDEAEQLAHEINEINKER
QEIVDKITVEAIEEISQSSNYIDDQVIVVGKEGWHAGVIGIVASRLVEKFYRPVIVFSFDQATGLAKGSARSIPKFNMYQ
NLFQCKELLPHFGGHPMAAGLTMKISDVPELRERLNRLASEQLDEEDFIPVTEVDGMIPLEDIHLQSVKELLQFAPFGTE
NPKPLLLINDIQLPQIKKVGADKNHLKAIIENHSAQLDCIGFHMGDLADEISPLSKASVIGELAINEWNHVSKPQFILKD
ICIDEWQLFDYRGNRRIDQWIHQVPEKSSKLIVFRKSTVNQMNLSEFAAGLEIIHSEASAKNCDIDGMNIVLIDLPQSKK
QLESLLAGKQVARIYAHFYQDDIELLNTMPTREHFKWMYAFLHKKGVFDFRRYGAELAKYKGWSLHTIKFMLTVFFELNF
VTMDNGILSVIKNPSKRDLSESKTYQLRQEIIQLEKELLFSSYKQLKNSLDRFIGTANMKEAKAWI

Nucleotide

• Length: 2361 bp

>NTDB_id=1067503 NSU12_RS12060 WP_343126746.1 2454258..2456618(-) (recJ) [Caldifermentibacillus hisashii strain FSL W8-0985]
ATGTTGCAAGCAAAGACGCGTTGGGCGGTTCGAGAAGGAAATCGTCAAAAAGCGGAACAATTAATGAATGAACTGCAGTT
GACACCTCTAGTAGCAAATTTATTAGTCAATCGAGGTTTAGATACGGCTGAAAGTGTAAAGAAATTTTTAAATCCGGATG
AAGAGTTTCACCATCCTTTTTTGCTTAATGATATGGATATATGTGTTGAACGAATTTTTCGGGCAATTCGAAATGGTGAG
CGAATGGTCGTGTATGGCGACTATGATGCCGATGGAGTAACAAGTACTTATGTATTATTGAAAACATTACGTGAACTCGG
TGCGGATGCCGATTTTTATATACCAAATCGCTTCACGGAAGGATACGGCCCAAATGAAAAAGCATTTCGAACACTGAAAG
AAGCCGGTTATCATTTAATTATCACGGTTGATAACGGAATTGCCGGGATTCATGAAGCAAAAGTGGCAAAAGAAATTGGT
ATTGATTTAATCATCACCGATCATCACGAACCCGGACCGGTACTCCCGGATTGTTTGGCGATTATTCATCCGAAGAGGGC
TGATTCCAATTACCCGTTTAAAGATTTAGCCGGTGTCGGTGTCGCGTTTAAATTGGTGGCGGCTCTTTTAGGGAAAGTTC
CGGAAGAATTGCTTCCGTTTGCAGCAATCGGAACTATAGCTGATTTAGTACCTCTCAAAGATGAAAATCGCTTGATTGTA
AAAAAAGCATTACCTCTCTTACAATCGTCAGATCATTTTGGTTTAAAGGCGTTAATGCGGGTTGCCGGGATCAATCAGCA
AGAATTAAATGAAGAATCAATTAGTTTTGGACTAGCCCCGCGGATAAACGCTCCCGGAAGATTATACCATGCCGGTATGG
TCGTTGATTTATTTTTGGCAAATGATAAAGATGAGGCTGAACAATTGGCCCATGAAATTAATGAAATCAATAAAGAAAGA
CAAGAAATCGTCGATAAAATAACTGTTGAAGCGATTGAGGAAATTTCTCAATCATCAAATTACATAGACGATCAGGTCAT
TGTGGTCGGTAAGGAAGGCTGGCATGCAGGGGTCATTGGCATTGTTGCTTCCAGATTAGTGGAAAAATTTTATCGGCCGG
TTATTGTTTTTTCTTTTGATCAAGCAACCGGATTGGCTAAGGGTTCGGCAAGAAGTATTCCAAAATTTAATATGTATCAA
AATTTGTTCCAATGTAAAGAACTTTTGCCGCATTTTGGCGGACACCCGATGGCTGCCGGGCTGACTATGAAAATCTCAGA
TGTTCCGGAATTAAGGGAACGGTTGAACCGGTTGGCAAGTGAACAATTAGATGAAGAGGATTTTATCCCGGTTACTGAAG
TCGATGGGATGATTCCATTAGAGGATATCCATTTGCAATCTGTGAAAGAATTGCTTCAGTTTGCCCCGTTTGGAACAGAA
AATCCTAAACCATTGCTTTTAATAAATGATATTCAATTGCCACAAATCAAAAAAGTCGGTGCAGATAAAAATCATCTGAA
AGCAATCATTGAAAACCATTCGGCTCAACTTGATTGTATCGGTTTTCATATGGGGGATCTTGCCGATGAAATATCACCAT
TATCGAAAGCTTCGGTCATTGGAGAGTTAGCGATTAATGAATGGAATCATGTCAGTAAACCGCAGTTCATATTAAAAGAT
ATTTGTATTGATGAATGGCAATTGTTTGATTATCGCGGTAACCGAAGAATCGACCAGTGGATTCATCAAGTGCCGGAAAA
AAGCAGTAAACTGATTGTTTTTCGCAAATCCACCGTCAACCAAATGAATTTATCCGAGTTCGCTGCCGGTCTTGAAATCA
TCCATTCTGAAGCCTCAGCGAAAAATTGTGATATCGACGGAATGAACATTGTTCTAATTGATTTACCCCAATCAAAAAAA
CAATTAGAGTCATTATTGGCAGGAAAGCAGGTTGCAAGAATTTATGCCCATTTTTATCAAGACGATATCGAACTCTTAAA
TACGATGCCGACAAGAGAACATTTTAAATGGATGTATGCATTCTTGCATAAAAAAGGTGTGTTTGATTTCCGGCGTTACG
GAGCTGAATTGGCGAAATATAAAGGATGGTCACTTCATACCATAAAATTTATGCTAACGGTGTTTTTTGAACTAAATTTT
GTTACAATGGATAATGGTATTCTTTCAGTTATAAAAAATCCGTCAAAACGAGATTTATCAGAATCGAAAACTTACCAATT
AAGACAGGAAATTATTCAATTGGAAAAAGAGTTGCTCTTTTCATCCTATAAACAATTAAAAAATAGTCTCGATAGATTTA
TCGGTACCGCAAATATGAAGGAGGCAAAGGCATGGATTTAG

Domains

Predicted by InterproScan.

• DHHA1 domain (DHHA1) (308-437)

• DHH family (DHH) (82-225)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (567-768)

• RecJ OB domain (RecJ_OB) (454-560)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Bacillus subtilis subsp. subtilis str. 168	51.613	98.601	0.509