Detailed information NTG1067408

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACHFB9_RS02190
• Genome accession: NZ_CP172404
• Coordinates: 467818..468849 (+)
• Length: 343 a.a.
• NCBI ID: WP_417069347.1
• Uniprot ID: -
• Organism: Niveibacterium terrae strain 24SJ04S-2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 462818..473849

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHFB9_RS02165 (ACHFB9_02165)	mutM	463377..464189 (+)	813	WP_417069342.1	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	-
ACHFB9_RS02170 (ACHFB9_02170)	-	464337..466298 (+)	1962	WP_417069343.1	dynamin family protein	-
ACHFB9_RS02175 (ACHFB9_02175)	-	466356..466610 (-)	255	WP_417069344.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ACHFB9_RS02180 (ACHFB9_02180)	coaD	466622..467116 (-)	495	WP_417069345.1	pantetheine-phosphate adenylyltransferase	-
ACHFB9_RS02185 (ACHFB9_02185)	rsmD	467113..467652 (-)	540	WP_417069346.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACHFB9_RS02190 (ACHFB9_02190)	pilA	467818..468849 (+)	1032	WP_417069347.1	signal recognition particle-docking protein FtsY	Machinery gene
ACHFB9_RS02195 (ACHFB9_02195)	-	468882..469535 (+)	654	WP_417069348.1	cell division ATP-binding protein FtsE	-
ACHFB9_RS02200 (ACHFB9_02200)	ftsX	469532..470440 (+)	909	WP_417069349.1	permease-like cell division protein FtsX	-
ACHFB9_RS02205 (ACHFB9_02205)	clsB	470448..471605 (-)	1158	WP_417069350.1	cardiolipin synthase ClsB	-
ACHFB9_RS02210 (ACHFB9_02210)	-	471602..472345 (-)	744	WP_417069351.1	endonuclease/exonuclease/phosphatase family protein	-
ACHFB9_RS02215 (ACHFB9_02215)	nadA	472407..473510 (-)	1104	WP_417069352.1	quinolinate synthase NadA	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 36770.95 Da
• Isoelectric Point: 5.5359

>NTDB_id=1067408 ACHFB9_RS02190 WP_417069347.1 467818..468849(+) (pilA) [Niveibacterium terrae strain 24SJ04S-2]
MLSFWKKDKNDAEAQAQDTPAPVEAPKLSWMERLRNGLSRTRAQINAAGSSLGAGVGALGDLFSRRRIDEDLLEELETTL
LTADCGVEATTYLITEIRKRWKRDRLETGEELRAVLKELLAGLLAPLQQSFDLDAHRPTIIMLAGVNGSGKTTSIGKLAK
RYQAEGKSVLLAAGDTFRAAAREQLQEWGRRNDVTVIAQDGGDPAAVVFDAITAARARGIDIVLADTAGRLPTQLHLMEE
IAKVRRVIQKADPSGPHEVLLVLDSNIGQNALAQLKAFDAAIGVTGLVVTKLDGTAKGGVLAAIARTQPKPIRYIGVGEG
IDDLQPFVASDFVSALFDDASAS

Nucleotide

• Length: 1032 bp

>NTDB_id=1067408 ACHFB9_RS02190 WP_417069347.1 467818..468849(+) (pilA) [Niveibacterium terrae strain 24SJ04S-2]
ATGCTCAGTTTCTGGAAAAAAGACAAAAACGACGCCGAAGCCCAGGCCCAGGATACGCCCGCACCGGTCGAAGCGCCCAA
GCTCTCGTGGATGGAGCGCCTGCGCAACGGGCTCTCGCGTACCCGGGCCCAGATCAATGCCGCGGGGTCGTCTCTGGGGG
CAGGAGTCGGCGCGCTCGGCGACCTCTTTTCGCGCCGCCGCATCGACGAGGATCTGCTCGAAGAACTCGAGACGACTCTG
CTGACCGCCGACTGTGGTGTCGAAGCGACGACGTATCTGATCACCGAGATCCGCAAGCGCTGGAAACGCGACCGGCTCGA
GACCGGTGAAGAGCTGCGCGCGGTATTGAAGGAATTGCTGGCCGGCCTGCTCGCCCCGCTTCAGCAGTCCTTCGACCTCG
ATGCCCACCGCCCGACCATCATCATGCTTGCCGGCGTCAACGGTTCGGGCAAGACGACTTCGATCGGCAAGCTCGCCAAA
CGCTACCAGGCCGAAGGCAAGAGTGTACTGCTCGCGGCCGGCGACACCTTCCGCGCTGCGGCGCGCGAACAGCTCCAGGA
GTGGGGGCGGCGCAACGATGTGACTGTGATCGCCCAGGATGGCGGAGACCCGGCCGCGGTCGTCTTCGACGCGATTACCG
CGGCGCGCGCCCGTGGGATAGACATCGTCCTCGCCGACACCGCGGGAAGGCTGCCGACCCAGCTCCATCTGATGGAGGAG
ATCGCGAAGGTGAGGCGGGTGATCCAGAAAGCCGATCCCAGCGGCCCCCATGAGGTGTTGCTGGTGCTCGACTCGAACAT
TGGCCAGAACGCTCTGGCCCAGTTGAAGGCTTTCGATGCCGCGATCGGAGTGACCGGTCTCGTCGTCACGAAGCTGGACG
GAACGGCCAAGGGCGGCGTGCTGGCGGCGATTGCCCGAACTCAGCCCAAGCCGATCCGCTACATCGGAGTCGGGGAGGGA
ATCGATGATCTCCAGCCCTTCGTGGCCAGCGATTTCGTCTCCGCGCTGTTCGACGACGCCAGCGCCAGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (138-337)

• SRP54-type protein, helical bundle domain (SRP54_N) (58-118)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	61.094	95.918	0.586