Detailed information NTG1067306

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: ACH6F1_RS06025
• Genome accession: NZ_CP172397
• Coordinates: 1143068..1144018 (+)
• Length: 316 a.a.
• NCBI ID: WP_395941492.1
• Uniprot ID: -
• Organism: Campylobacter coli strain YH506
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1138068..1149018

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH6F1_RS06000 (ACH6F1_05990)	neuC	1138599..1139723 (+)	1125	WP_002859249.1	UDP-N-acetylglucosamine 2-epimerase	-
ACH6F1_RS06005 (ACH6F1_05995)	-	1139716..1140663 (+)	948	WP_052773810.1	glycosyltransferase	-
ACH6F1_RS06010 (ACH6F1_06000)	-	1140660..1141319 (+)	660	WP_240366994.1	cytidylyltransferase domain-containing protein	-
ACH6F1_RS06015 (ACH6F1_06005)	-	1141316..1142146 (-)	831	WP_395941490.1	glycosyltransferase	-
ACH6F1_RS06020 (ACH6F1_06010)	-	1142200..1143009 (-)	810	WP_395941491.1	glycosyltransferase family 2 protein	-
ACH6F1_RS06025 (ACH6F1_06015)	waaF	1143068..1144018 (+)	951	WP_395941492.1	lipopolysaccharide heptosyltransferase II	Regulator
ACH6F1_RS06030 (ACH6F1_06020)	-	1144004..1144768 (-)	765	WP_002825331.1	glycosyltransferase family 25 protein	-
ACH6F1_RS06035 (ACH6F1_06025)	gmhA	1144768..1145328 (-)	561	WP_395941493.1	D-sedoheptulose 7-phosphate isomerase	-
ACH6F1_RS06040 (ACH6F1_06030)	rfaE1	1145325..1146710 (-)	1386	WP_395941494.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
ACH6F1_RS06045 (ACH6F1_06035)	rfaD	1146703..1147656 (-)	954	WP_044600825.1	ADP-glyceromanno-heptose 6-epimerase	-
ACH6F1_RS06050 (ACH6F1_06040)	-	1147657..1148217 (-)	561	WP_058001366.1	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	-
ACH6F1_RS06055 (ACH6F1_06045)	-	1148294..1148593 (+)	300	WP_002777238.1	cytochrome c	-
ACH6F1_RS06060 (ACH6F1_06050)	-	1148623..1148823 (-)	201	WP_002777240.1	cbb3-type cytochrome oxidase assembly protein	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36217.84 Da
• Isoelectric Point: 10.2421

>NTDB_id=1067306 ACH6F1_RS06025 WP_395941492.1 1143068..1144018(+) (waaF) [Campylobacter coli strain YH506]
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFT
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENALSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAILVHLDLACMPCMQKTCPLKHHKCMKDLKPEVIVKAIQNLINI

Nucleotide

• Length: 951 bp

>NTDB_id=1067306 ACH6F1_RS06025 WP_395941492.1 1143068..1144018(+) (waaF) [Campylobacter coli strain YH506]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGTAAAGAACTTGGTAAAATCGATCTTAGCTTTACT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACGCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAACGATAGC
GGCCCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAACGCAATATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAGTGATTGTAAAAGCGATTCAAAATTTAATTAATATCTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.994	99.367	0.924