Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | ACH6E9_RS05705 | Genome accession | NZ_CP172392 |
| Coordinates | 1069936..1070241 (+) | Length | 101 a.a. |
| NCBI ID | WP_002777852.1 | Uniprot ID | A0A3Z9CUC7 |
| Organism | Campylobacter coli strain YH507 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1064936..1075241
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6E9_RS05680 (ACH6E9_05685) | rpsR | 1065294..1065554 (+) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
| ACH6E9_RS05685 (ACH6E9_05690) | lon | 1065611..1067986 (-) | 2376 | WP_057032694.1 | endopeptidase La | - |
| ACH6E9_RS05690 (ACH6E9_05695) | - | 1068002..1068649 (-) | 648 | WP_002777091.1 | outer membrane protein assembly factor BamD | - |
| ACH6E9_RS05695 (ACH6E9_05700) | fliW | 1068813..1069202 (+) | 390 | WP_002777093.1 | flagellar assembly protein FliW | - |
| ACH6E9_RS05700 (ACH6E9_05705) | proC | 1069202..1069939 (+) | 738 | WP_002787902.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| ACH6E9_RS05705 (ACH6E9_05710) | ctsT | 1069936..1070241 (+) | 306 | WP_002777852.1 | hypothetical protein | Machinery gene |
| ACH6E9_RS05710 (ACH6E9_05715) | - | 1070234..1070902 (+) | 669 | WP_002777103.1 | hypothetical protein | - |
| ACH6E9_RS05715 (ACH6E9_05720) | - | 1070899..1071351 (+) | 453 | WP_002777117.1 | hypothetical protein | - |
| ACH6E9_RS05720 (ACH6E9_05725) | - | 1071344..1071973 (-) | 630 | WP_002795166.1 | uroporphyrinogen-III synthase | - |
| ACH6E9_RS05725 (ACH6E9_05730) | thiE | 1071951..1072583 (-) | 633 | WP_002777120.1 | thiamine phosphate synthase | - |
| ACH6E9_RS05730 (ACH6E9_05735) | thiD | 1072573..1073385 (-) | 813 | WP_002801119.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACH6E9_RS05735 (ACH6E9_05740) | - | 1073385..1074068 (-) | 684 | WP_002777124.1 | 3-methyladenine DNA glycosylase | - |
| ACH6E9_RS05740 (ACH6E9_05745) | - | 1074065..1074826 (-) | 762 | WP_025431509.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 12396.25 Da Isoelectric Point: 6.0617
>NTDB_id=1067258 ACH6E9_RS05705 WP_002777852.1 1069936..1070241(+) (ctsT) [Campylobacter coli strain YH507]
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
Nucleotide
Download Length: 306 bp
>NTDB_id=1067258 ACH6E9_RS05705 WP_002777852.1 1069936..1070241(+) (ctsT) [Campylobacter coli strain YH507]
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
50 |
97.03 |
0.485 |