Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | ACH6F0_RS03805 | Genome accession | NZ_CP172390 |
| Coordinates | 736747..737052 (-) | Length | 101 a.a. |
| NCBI ID | WP_002777852.1 | Uniprot ID | A0A3Z9CUC7 |
| Organism | Campylobacter coli strain YH509 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 731747..742052
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6F0_RS03770 (ACH6F0_03770) | - | 732162..732923 (+) | 762 | WP_072212081.1 | ATP-binding protein | - |
| ACH6F0_RS03775 (ACH6F0_03775) | - | 732920..733603 (+) | 684 | WP_002791740.1 | 3-methyladenine DNA glycosylase | - |
| ACH6F0_RS03780 (ACH6F0_03780) | thiD | 733603..734415 (+) | 813 | WP_002822374.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACH6F0_RS03785 (ACH6F0_03785) | thiE | 734405..735037 (+) | 633 | WP_052785692.1 | thiamine phosphate synthase | - |
| ACH6F0_RS03790 (ACH6F0_03790) | - | 735015..735644 (+) | 630 | WP_002783358.1 | uroporphyrinogen-III synthase | - |
| ACH6F0_RS03795 (ACH6F0_03795) | - | 735637..736089 (-) | 453 | WP_002777117.1 | hypothetical protein | - |
| ACH6F0_RS03800 (ACH6F0_03800) | - | 736086..736754 (-) | 669 | WP_052774029.1 | hypothetical protein | - |
| ACH6F0_RS03805 (ACH6F0_03805) | ctsT | 736747..737052 (-) | 306 | WP_002777852.1 | hypothetical protein | Machinery gene |
| ACH6F0_RS03810 (ACH6F0_03810) | proC | 737049..737786 (-) | 738 | WP_002780246.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| ACH6F0_RS03815 (ACH6F0_03815) | fliW | 737786..738175 (-) | 390 | WP_002777093.1 | flagellar assembly protein FliW | - |
| ACH6F0_RS03820 (ACH6F0_03820) | - | 738339..738986 (+) | 648 | WP_002777091.1 | outer membrane protein assembly factor BamD | - |
| ACH6F0_RS03825 (ACH6F0_03825) | lon | 739002..741377 (+) | 2376 | WP_002783351.1 | endopeptidase La | - |
| ACH6F0_RS03830 (ACH6F0_03830) | rpsR | 741433..741693 (-) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 12396.25 Da Isoelectric Point: 6.0617
>NTDB_id=1067219 ACH6F0_RS03805 WP_002777852.1 736747..737052(-) (ctsT) [Campylobacter coli strain YH509]
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
Nucleotide
Download Length: 306 bp
>NTDB_id=1067219 ACH6F0_RS03805 WP_002777852.1 736747..737052(-) (ctsT) [Campylobacter coli strain YH509]
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
50 |
97.03 |
0.485 |