Detailed information NTG1067217

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: ACH6F0_RS03475
• Genome accession: NZ_CP172390
• Coordinates: 670794..671738 (-)
• Length: 314 a.a.
• NCBI ID: WP_002777230.1
• Uniprot ID: A0A3Z8C350
• Organism: Campylobacter coli strain YH509
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 665794..676738

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH6F0_RS03440 (ACH6F0_03440)	-	665986..666186 (+)	201	WP_002777240.1	cbb3-type cytochrome oxidase assembly protein	-
ACH6F0_RS03445 (ACH6F0_03445)	-	666216..666515 (-)	300	WP_002777238.1	cytochrome c	-
ACH6F0_RS03450 (ACH6F0_03450)	-	666592..667155 (+)	564	WP_057031147.1	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	-
ACH6F0_RS03455 (ACH6F0_03455)	rfaD	667152..668105 (+)	954	WP_057031145.1	ADP-glyceromanno-heptose 6-epimerase	-
ACH6F0_RS03460 (ACH6F0_03460)	rfaE1	668098..669483 (+)	1386	WP_038853886.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
ACH6F0_RS03465 (ACH6F0_03465)	gmhA	669480..670040 (+)	561	WP_002831598.1	D-sedoheptulose 7-phosphate isomerase	-
ACH6F0_RS03470 (ACH6F0_03470)	-	670040..670801 (+)	762	WP_002826801.1	glycosyltransferase family 25 protein	-
ACH6F0_RS03475 (ACH6F0_03475)	waaF	670794..671738 (-)	945	WP_002777230.1	lipopolysaccharide heptosyltransferase II	Regulator
ACH6F0_RS03480 (ACH6F0_03480)	-	671797..672618 (+)	822	WP_032685539.1	glycosyltransferase family 2 protein	-
ACH6F0_RS03485 (ACH6F0_03485)	-	672959..673105 (-)	147	WP_168848228.1	hypothetical protein	-
ACH6F0_RS03490 (ACH6F0_03490)	-	673102..673338 (-)	237	WP_255296982.1	alpha-2,3-sialyltransferase	-
ACH6F0_RS03495 (ACH6F0_03495)	-	673346..673659 (-)	314	Protein_681	alpha-2,3-sialyltransferase	-
ACH6F0_RS03500 (ACH6F0_03500)	-	673787..674587 (+)	801	WP_002777224.1	class I SAM-dependent methyltransferase	-
ACH6F0_RS03505 (ACH6F0_03505)	-	674668..675603 (+)	936	WP_002777223.1	glycosyltransferase family 2 protein	-

Sequence

Protein

• Length: 314 a.a.
• Molecular weight: 36065.60 Da
• Isoelectric Point: 10.2686

>NTDB_id=1067217 ACH6F0_RS03475 WP_002777230.1 670794..671738(-) (waaF) [Campylobacter coli strain YH509]
MKVFIHLPTWLGDAVMASPALYGVYHYFKNAEFILYGSFVSTALFKEFPNAKIIVENKKSRYKQALSLRKKLGKIDLALS
FRSALSSKIILHILKVKQRYFFNKYDFKEEHQVLKYLYFIENSLEIKAHSKDLKLPFKLKFQNPIVLKNGKKILGLNPGA
SFGSAKRWDASYFAQVALNFSKTHEILIFGAGKAEQELCDEIFHILKEKNVKVKNLCNKTTIKTLCQNIVFCDIFITNDS
GPMHIAAAYKTKTIAIFGPTKFTQTSPWQNQNAKLVHLNLSCMPCMQKTCPLKHHRCMKDLKPEKILEAIQNFT

Nucleotide

• Length: 945 bp

>NTDB_id=1067217 ACH6F0_RS03475 WP_002777230.1 670794..671738(-) (waaF) [Campylobacter coli strain YH509]
ATGAAAGTTTTTATCCATCTTCCCACTTGGCTAGGCGATGCAGTCATGGCCTCACCTGCTTTATATGGAGTTTATCATTA
TTTTAAAAATGCTGAATTTATCCTTTATGGATCTTTTGTATCTACAGCGCTTTTTAAGGAATTTCCTAATGCTAAAATCA
TTGTAGAAAATAAAAAATCACGCTACAAACAAGCCCTTTCTTTACGCAAAAAACTTGGAAAAATCGATCTAGCCCTTTCT
TTTAGATCAGCCCTTTCCTCCAAGATCATTTTACACATCCTTAAGGTAAAACAAAGATATTTTTTTAACAAATATGATTT
TAAAGAAGAACATCAGGTTTTAAAATATCTTTATTTTATAGAAAATTCATTAGAAATTAAAGCTCATTCTAAGGATTTAA
AACTTCCTTTTAAATTAAAATTTCAAAATCCTATTGTTTTAAAAAATGGCAAAAAAATCCTAGGATTAAACCCTGGAGCG
AGTTTTGGAAGTGCTAAAAGATGGGATGCGAGCTATTTTGCACAAGTTGCTTTAAATTTTAGCAAAACTCATGAAATTTT
GATTTTTGGAGCAGGTAAAGCAGAACAAGAACTTTGCGATGAAATTTTTCATATACTAAAAGAAAAAAATGTCAAAGTAA
AAAATCTTTGCAATAAAACCACTATCAAAACCCTTTGTCAAAATATCGTTTTTTGTGATATTTTCATCACAAACGATAGC
GGCCCTATGCACATAGCTGCCGCTTATAAAACAAAAACCATAGCTATTTTTGGGCCTACTAAATTTACCCAAACCTCACC
TTGGCAAAATCAAAATGCAAAATTAGTACATCTAAATTTATCTTGCATGCCTTGCATGCAAAAAACCTGTCCTTTAAAAC
ATCATCGGTGCATGAAAGATTTAAAACCGGAAAAAATTTTAGAAGCAATCCAAAATTTTACTTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (106-294)

3D structure

• AlphaFold DB: A0A3Z8C350

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	83.067	99.682	0.828