Detailed information NTG1067190

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: ACH6FT_RS03290
• Genome accession: NZ_CP172387
• Coordinates: 650491..651435 (-)
• Length: 314 a.a.
• NCBI ID: WP_002791232.1
• Uniprot ID: A0A3Z9VJK7
• Organism: Campylobacter coli strain YH510
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 645491..656435

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH6FT_RS03265 (ACH6FT_03265)	-	645594..646157 (+)	564	WP_395941014.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
ACH6FT_RS03270 (ACH6FT_03270)	rfaD	646154..647107 (+)	954	WP_395941015.1	ADP-glyceromanno-heptose 6-epimerase	-
ACH6FT_RS03275 (ACH6FT_03275)	rfaE1	647100..648485 (+)	1386	WP_057992748.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
ACH6FT_RS03280 (ACH6FT_03280)	gmhA	648482..649042 (+)	561	WP_395941016.1	D-sedoheptulose 7-phosphate isomerase	-
ACH6FT_RS03285 (ACH6FT_03285)	-	649054..650508 (+)	1455	WP_057041880.1	hypothetical protein	-
ACH6FT_RS03290 (ACH6FT_03290)	waaF	650491..651435 (-)	945	WP_002791232.1	lipopolysaccharide heptosyltransferase II	Regulator
ACH6FT_RS03295 (ACH6FT_03295)	-	651494..652309 (+)	816	WP_057991291.1	glycosyltransferase family 2 protein	-
ACH6FT_RS03300 (ACH6FT_03300)	-	652328..652744 (-)	417	WP_002796922.1	adenylyltransferase/cytidyltransferase family protein	-
ACH6FT_RS03305 (ACH6FT_03305)	-	652747..653796 (-)	1050	WP_057041879.1	asparagine synthase-related protein	-
ACH6FT_RS03310 (ACH6FT_03310)	-	653793..654905 (-)	1113	WP_194941613.1	CDP-glycerol glycerophosphotransferase family protein	-
ACH6FT_RS03315 (ACH6FT_03315)	-	655224..656423 (+)	1200	WP_057980448.1	glycosyltransferase family 8 protein	-

Sequence

Protein

• Length: 314 a.a.
• Molecular weight: 36168.65 Da
• Isoelectric Point: 10.1355

>NTDB_id=1067190 ACH6FT_RS03290 WP_002791232.1 650491..651435(-) (waaF) [Campylobacter coli strain YH510]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELDKIDLSFT
FRSAFSSKIILHILKTRQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHSKDLKLPFKLKFQNPIVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHIAAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKICPLKHHKCMKDLKPEMVLEKLKFDT

Nucleotide

• Length: 945 bp

>NTDB_id=1067190 ACH6FT_RS03290 WP_002791232.1 650491..651435(-) (waaF) [Campylobacter coli strain YH510]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGTAAAGAACTTGATAAAATCGATCTTAGCTTCACT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAGACAAAGATATTTTTTTGACAAAAATAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTAGATATCAAAGCTCATTCTAAGGATTTAA
AACTCCCTTTTAAATTAAAATTTCAAAATCCTATTGTTTTAAAAAATGGCAAAAAAATCTTAGGTTTAAACCCTGGAGCA
AGCTTTGGAAGCGCTAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTGA
AAAATCTTTGCAACAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGCCCTATGCATATAGCTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAATGGTTTTAGAAAAATTAAAATTTGATACTTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

3D structure

• AlphaFold DB: A0A3Z9VJK7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.926	99.045	0.92