Detailed information
Bioinformatically predicted
Overview
| Name | ctsR | Type | Machinery gene |
| Locus tag | ACH6FT_RS01585 | Genome accession | NZ_CP172387 |
| Coordinates | 314318..314629 (+) | Length | 103 a.a. |
| NCBI ID | WP_002779316.1 | Uniprot ID | A0A3K5JRX6 |
| Organism | Campylobacter coli strain YH510 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 309318..319629
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FT_RS01575 (ACH6FT_01575) | - | 309992..310630 (+) | 639 | WP_002784063.1 | HAD family hydrolase | - |
| ACH6FT_RS01580 (ACH6FT_01580) | nifJ | 310734..314294 (+) | 3561 | WP_002779317.1 | pyruvate:ferredoxin (flavodoxin) oxidoreductase | - |
| ACH6FT_RS01585 (ACH6FT_01585) | ctsR | 314318..314629 (+) | 312 | WP_002779316.1 | hypothetical protein | Machinery gene |
| ACH6FT_RS01590 (ACH6FT_01590) | ctsD | 314607..316025 (+) | 1419 | WP_002779315.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| ACH6FT_RS01595 (ACH6FT_01595) | ctsP | 316018..316614 (+) | 597 | WP_002779314.1 | ATP-binding protein | Machinery gene |
| ACH6FT_RS01600 (ACH6FT_01600) | - | 316611..317207 (+) | 597 | WP_002779313.1 | CDC27 family protein | - |
| ACH6FT_RS01605 (ACH6FT_01605) | ctsE | 317200..318762 (+) | 1563 | WP_002779312.1 | GspE/PulE family protein | Machinery gene |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 12269.30 Da Isoelectric Point: 6.3244
>NTDB_id=1067177 ACH6FT_RS01585 WP_002779316.1 314318..314629(+) (ctsR) [Campylobacter coli strain YH510]
MCFCTLLSYEDFEEYFKILNTKQNVELGNLQNPFFNPTFEKIKDIKIIAIMLDRVKIDNKWYKKGDKIGEAVITDITTKE
IILRYDTLDFKIAFKNNDKINIY
MCFCTLLSYEDFEEYFKILNTKQNVELGNLQNPFFNPTFEKIKDIKIIAIMLDRVKIDNKWYKKGDKIGEAVITDITTKE
IILRYDTLDFKIAFKNNDKINIY
Nucleotide
Download Length: 312 bp
>NTDB_id=1067177 ACH6FT_RS01585 WP_002779316.1 314318..314629(+) (ctsR) [Campylobacter coli strain YH510]
TTGTGCTTTTGCACTTTGTTATCATATGAGGATTTTGAAGAATATTTTAAGATTTTAAACACCAAGCAGAATGTAGAGCT
TGGAAATCTTCAAAATCCATTCTTTAATCCTACTTTTGAAAAAATCAAAGACATAAAAATTATTGCTATTATGCTTGATA
GAGTAAAGATTGATAATAAATGGTATAAAAAGGGTGATAAGATAGGGGAGGCCGTGATTACTGATATTACTACAAAAGAA
ATTATTTTAAGATATGATACTTTGGATTTTAAAATAGCGTTTAAAAACAATGATAAGATTAATATTTATTAA
TTGTGCTTTTGCACTTTGTTATCATATGAGGATTTTGAAGAATATTTTAAGATTTTAAACACCAAGCAGAATGTAGAGCT
TGGAAATCTTCAAAATCCATTCTTTAATCCTACTTTTGAAAAAATCAAAGACATAAAAATTATTGCTATTATGCTTGATA
GAGTAAAGATTGATAATAAATGGTATAAAAAGGGTGATAAGATAGGGGAGGCCGTGATTACTGATATTACTACAAAAGAA
ATTATTTTAAGATATGATACTTTGGATTTTAAAATAGCGTTTAAAAACAATGATAAGATTAATATTTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsR | Campylobacter jejuni subsp. jejuni 81-176 |
55.882 |
99.029 |
0.553 |