Detailed information NTG1067166

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: ACH6FK_RS03220
• Genome accession: NZ_CP172385
• Coordinates: 637125..638069 (-)
• Length: 314 a.a.
• NCBI ID: WP_002844797.1
• Uniprot ID: -
• Organism: Campylobacter coli strain YH511
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 632125..643069

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH6FK_RS03185 (ACH6FK_03185)	-	632317..632517 (+)	201	WP_002777240.1	cbb3-type cytochrome oxidase assembly protein	-
ACH6FK_RS03190 (ACH6FK_03190)	-	632547..632846 (-)	300	WP_002777238.1	cytochrome c	-
ACH6FK_RS03195 (ACH6FK_03195)	-	632923..633486 (+)	564	WP_002777235.1	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	-
ACH6FK_RS03200 (ACH6FK_03200)	rfaD	633483..634436 (+)	954	WP_002796912.1	ADP-glyceromanno-heptose 6-epimerase	-
ACH6FK_RS03205 (ACH6FK_03205)	rfaE1	634429..635814 (+)	1386	WP_002844795.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
ACH6FK_RS03210 (ACH6FK_03210)	gmhA	635811..636371 (+)	561	WP_002806601.1	D-sedoheptulose 7-phosphate isomerase	-
ACH6FK_RS03215 (ACH6FK_03215)	-	636371..637132 (+)	762	Protein_624	glycosyltransferase family 25 protein	-
ACH6FK_RS03220 (ACH6FK_03220)	waaF	637125..638069 (-)	945	WP_002844797.1	lipopolysaccharide heptosyltransferase II	Regulator
ACH6FK_RS03225 (ACH6FK_03225)	-	638129..638950 (+)	822	WP_002844798.1	glycosyltransferase family 2 protein	-
ACH6FK_RS03230 (ACH6FK_03230)	-	638993..640360 (+)	1368	WP_002844799.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	-
ACH6FK_RS03235 (ACH6FK_03235)	gmd	640361..641500 (+)	1140	WP_002844800.1	GDP-mannose 4,6-dehydratase	-
ACH6FK_RS03240 (ACH6FK_03240)	-	641493..642431 (+)	939	WP_002844801.1	NAD-dependent epimerase/dehydratase family protein	-

Sequence

Protein

• Length: 314 a.a.
• Molecular weight: 36096.73 Da
• Isoelectric Point: 10.3770

>NTDB_id=1067166 ACH6FK_RS03220 WP_002844797.1 637125..638069(-) (waaF) [Campylobacter coli strain YH511]
MKIFIHLPTWLGDAVMASPALYGVYHHFKNAEFILYGSFVSTALFKEFPNAKIIVENKKSRYKQTLSLRKKLGKIDLALS
FRSALSSKIILHILKAKKRYFFNKYNFKEEHQVLKYLYFIENSLDIKAHSKDLKLPFRLKFQNPIVLKNGKKILGLNPGA
SFGSAKRWDASYFAQVALNFSKTHEILIFGAGKAEQELCDEIFHILKEKNVKVKNLCNKTTIKMLCQNIIFCDIFITNDS
GPMHIAAAYKTKTIAIFGPTKFTQTSPWQNQNAKLVHLNLACMPCMQKTCPLKHHQCMKDLKPEKILEAIRNFT

Nucleotide

• Length: 945 bp

>NTDB_id=1067166 ACH6FK_RS03220 WP_002844797.1 637125..638069(-) (waaF) [Campylobacter coli strain YH511]
ATGAAAATTTTTATCCATCTTCCCACTTGGCTAGGCGATGCAGTCATGGCCTCACCTGCTTTATATGGAGTTTATCATCA
TTTTAAAAATGCTGAATTTATCCTTTATGGATCTTTTGTATCTACAGCGCTTTTTAAGGAATTTCCTAATGCTAAAATCA
TTGTAGAAAATAAAAAATCACGCTACAAACAAACCCTTTCTTTACGCAAAAAACTTGGAAAAATCGATCTAGCCCTTTCT
TTTAGATCAGCTCTTTCCTCTAAGATCATTTTGCATATCCTTAAGGCAAAAAAAAGATATTTTTTTAACAAGTATAATTT
CAAAGAAGAACATCAGGTTTTAAAATATCTTTATTTTATAGAAAATTCACTAGATATCAAAGCTCATTCTAAGGATTTAA
AACTCCCTTTTAGATTAAAATTTCAAAATCCTATTGTTTTAAAAAATGGCAAAAAAATCCTAGGCTTAAATCCTGGAGCA
AGTTTTGGAAGTGCTAAAAGATGGGATGCGAGTTATTTTGCACAAGTTGCTTTAAATTTTAGCAAAACTCATGAAATTTT
GATTTTTGGAGCGGGCAAGGCAGAACAAGAACTTTGCGATGAAATTTTTCATATATTAAAAGAAAAAAATGTCAAGGTAA
AAAATCTTTGCAATAAAACCACCATCAAAATGCTTTGTCAAAATATCATTTTTTGTGATATCTTCATCACAAATGATAGT
GGCCCTATGCACATAGCTGCCGCTTATAAAACAAAAACCATAGCTATCTTTGGGCCTACTAAATTTACCCAAACCTCACC
TTGGCAAAATCAAAATGCAAAATTAGTACATCTAAATTTAGCTTGTATGCCTTGCATGCAAAAAACCTGCCCTTTAAAAC
ATCATCAGTGTATGAAAGATTTAAAACCGGAAAAAATTTTAGAAGCAATCCGAAATTTTACTTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (108-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	82.748	99.682	0.825