Detailed information
Bioinformatically predicted
Overview
| Name | ctsR | Type | Machinery gene |
| Locus tag | ACH6FK_RS01535 | Genome accession | NZ_CP172385 |
| Coordinates | 306635..306946 (+) | Length | 103 a.a. |
| NCBI ID | WP_002779316.1 | Uniprot ID | A0A3K5JRX6 |
| Organism | Campylobacter coli strain YH511 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 301635..311946
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FK_RS01525 (ACH6FK_01525) | - | 302309..302947 (+) | 639 | WP_002784063.1 | HAD family hydrolase | - |
| ACH6FK_RS01530 (ACH6FK_01530) | nifJ | 303051..306611 (+) | 3561 | WP_002790306.1 | pyruvate:ferredoxin (flavodoxin) oxidoreductase | - |
| ACH6FK_RS01535 (ACH6FK_01535) | ctsR | 306635..306946 (+) | 312 | WP_002779316.1 | hypothetical protein | Machinery gene |
| ACH6FK_RS01540 (ACH6FK_01540) | ctsD | 306924..308342 (+) | 1419 | WP_002833219.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| ACH6FK_RS01545 (ACH6FK_01545) | ctsP | 308335..308931 (+) | 597 | WP_002779314.1 | ATP-binding protein | Machinery gene |
| ACH6FK_RS01550 (ACH6FK_01550) | - | 308928..309524 (+) | 597 | WP_002779313.1 | CDC27 family protein | - |
| ACH6FK_RS01555 (ACH6FK_01555) | ctsE | 309517..311079 (+) | 1563 | WP_002779312.1 | GspE/PulE family protein | Machinery gene |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 12269.30 Da Isoelectric Point: 6.3244
>NTDB_id=1067151 ACH6FK_RS01535 WP_002779316.1 306635..306946(+) (ctsR) [Campylobacter coli strain YH511]
MCFCTLLSYEDFEEYFKILNTKQNVELGNLQNPFFNPTFEKIKDIKIIAIMLDRVKIDNKWYKKGDKIGEAVITDITTKE
IILRYDTLDFKIAFKNNDKINIY
MCFCTLLSYEDFEEYFKILNTKQNVELGNLQNPFFNPTFEKIKDIKIIAIMLDRVKIDNKWYKKGDKIGEAVITDITTKE
IILRYDTLDFKIAFKNNDKINIY
Nucleotide
Download Length: 312 bp
>NTDB_id=1067151 ACH6FK_RS01535 WP_002779316.1 306635..306946(+) (ctsR) [Campylobacter coli strain YH511]
TTGTGTTTTTGCACTTTGTTATCATATGAGGATTTTGAAGAATATTTTAAGATTTTAAACACCAAGCAGAATGTAGAGCT
TGGAAATCTTCAAAATCCATTCTTTAATCCTACTTTTGAAAAAATCAAAGACATAAAAATTATTGCTATTATGCTTGATA
GAGTAAAGATTGATAATAAATGGTATAAAAAGGGTGATAAGATAGGGGAGGCCGTGATTACTGATATTACTACAAAAGAA
ATTATTTTAAGATATGATACTTTGGATTTTAAAATAGCGTTTAAAAACAATGATAAGATTAATATTTATTAA
TTGTGTTTTTGCACTTTGTTATCATATGAGGATTTTGAAGAATATTTTAAGATTTTAAACACCAAGCAGAATGTAGAGCT
TGGAAATCTTCAAAATCCATTCTTTAATCCTACTTTTGAAAAAATCAAAGACATAAAAATTATTGCTATTATGCTTGATA
GAGTAAAGATTGATAATAAATGGTATAAAAAGGGTGATAAGATAGGGGAGGCCGTGATTACTGATATTACTACAAAAGAA
ATTATTTTAAGATATGATACTTTGGATTTTAAAATAGCGTTTAAAAACAATGATAAGATTAATATTTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsR | Campylobacter jejuni subsp. jejuni 81-176 |
55.882 |
99.029 |
0.553 |