Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | ACH6FE_RS03595 | Genome accession | NZ_CP172384 |
| Coordinates | 711142..711447 (-) | Length | 101 a.a. |
| NCBI ID | WP_002777852.1 | Uniprot ID | A0A3Z9CUC7 |
| Organism | Campylobacter coli strain YH512 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 706142..716447
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FE_RS03560 (ACH6FE_03560) | - | 706557..707318 (+) | 762 | WP_072212081.1 | ATP-binding protein | - |
| ACH6FE_RS03565 (ACH6FE_03565) | - | 707315..707998 (+) | 684 | WP_150966194.1 | 3-methyladenine DNA glycosylase | - |
| ACH6FE_RS03570 (ACH6FE_03570) | thiD | 707998..708810 (+) | 813 | WP_395941335.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACH6FE_RS03575 (ACH6FE_03575) | thiE | 708800..709432 (+) | 633 | WP_002777120.1 | thiamine phosphate synthase | - |
| ACH6FE_RS03580 (ACH6FE_03580) | - | 709410..710039 (+) | 630 | WP_002777119.1 | uroporphyrinogen-III synthase | - |
| ACH6FE_RS03585 (ACH6FE_03585) | - | 710032..710484 (-) | 453 | WP_150966196.1 | hypothetical protein | - |
| ACH6FE_RS03590 (ACH6FE_03590) | - | 710481..711149 (-) | 669 | WP_052780494.1 | hypothetical protein | - |
| ACH6FE_RS03595 (ACH6FE_03595) | ctsT | 711142..711447 (-) | 306 | WP_002777852.1 | hypothetical protein | Machinery gene |
| ACH6FE_RS03600 (ACH6FE_03600) | proC | 711444..712181 (-) | 738 | WP_002780246.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| ACH6FE_RS03605 (ACH6FE_03605) | fliW | 712181..712570 (-) | 390 | WP_002777093.1 | flagellar assembly protein FliW | - |
| ACH6FE_RS03610 (ACH6FE_03610) | - | 712734..713381 (+) | 648 | WP_002777091.1 | outer membrane protein assembly factor BamD | - |
| ACH6FE_RS03615 (ACH6FE_03615) | lon | 713397..715772 (+) | 2376 | WP_002783351.1 | endopeptidase La | - |
| ACH6FE_RS03620 (ACH6FE_03620) | rpsR | 715828..716088 (-) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 12396.25 Da Isoelectric Point: 6.0617
>NTDB_id=1067140 ACH6FE_RS03595 WP_002777852.1 711142..711447(-) (ctsT) [Campylobacter coli strain YH512]
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
Nucleotide
Download Length: 306 bp
>NTDB_id=1067140 ACH6FE_RS03595 WP_002777852.1 711142..711447(-) (ctsT) [Campylobacter coli strain YH512]
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTACAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTACAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
50 |
97.03 |
0.485 |